Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_E08
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0664 - 21659497-21659547,21659750-21659860,21659971-216600...   333   1e-91
07_01_1132 + 10531922-10532136,10532307-10532433,10532945-105331...    86   3e-17
06_03_0615 - 22761375-22761760,22762218-22765026                       29   6.5  
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702...    28   8.6  

>12_02_0664 -
           21659497-21659547,21659750-21659860,21659971-21660039,
           21660442-21660513,21660669-21660749,21661256-21661348,
           21661581-21661733,21661846-21661897,21662033-21662218,
           21662830-21662949,21663059-21663297
          Length = 408

 Score =  333 bits (818), Expect = 1e-91
 Identities = 148/249 (59%), Positives = 197/249 (79%), Gaps = 2/249 (0%)
 Frame = +1

Query: 118 EDEDFVDPWTVT-GKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGIFF 294
           E+E  V+PW V+ GK   GIDYDKL+ +FG Q++DD L+ R  ++  R  H  LRRG+FF
Sbjct: 20  EEEQVVNPWEVSAGKG--GIDYDKLVDQFGCQRLDDALVARVARLTARPPHRFLRRGLFF 77

Query: 295 SHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLTDD 474
           +HRDLN IL+L+E G+KFYLYTGRGPSS+++HLGH+IPFMFTK+LQD F VPL+IQLTDD
Sbjct: 78  AHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVIQLTDD 137

Query: 475 EKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQKCV 654
           EK LW+++ VE+ +++A  NAKDIIA GFD   TFIF+D +++G   AFY+NM+++ +CV
Sbjct: 138 EKFLWKNLTVEETKRLARENAKDIIACGFDVERTFIFSDFNYVG--GAFYENMVKVARCV 195

Query: 655 TYNQVKGIFGFGDSDVIGKITFPSIEAAPAFSTTFPFIFE-NKIVHCLVPCAIDQDPYFR 831
           TYN+V GIFGF   D IGK++FP ++A P+F ++FP +F  N  + CL+PCAIDQDPYFR
Sbjct: 196 TYNKVVGIFGFTPEDHIGKVSFPPVQAVPSFPSSFPHLFSGNDQLRCLIPCAIDQDPYFR 255

Query: 832 MTRDVAVRL 858
           MTRDVA R+
Sbjct: 256 MTRDVAPRI 264


>07_01_1132 +
           10531922-10532136,10532307-10532433,10532945-10533100,
           10533755-10533847,10534010-10534090,10534205-10534276,
           10534608-10534676,10534764-10534874,10535039-10535089
          Length = 324

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
 Frame = +1

Query: 667 VKGIFGFGDSDVIGKITFPSIEAAPAFSTTFPFIFENKIVH--CLVPCAIDQDPYFRMTR 840
           +KGIFG    D IGK++FP ++AA +FS++FP +F +   H  CL+PCAIDQDPYFRMT 
Sbjct: 115 LKGIFGISPEDQIGKVSFPPVQAAQSFSSSFPHLFHDNDDHLPCLIPCAIDQDPYFRMTC 174

Query: 841 DVAVRL 858
           DVA +L
Sbjct: 175 DVAPKL 180


>06_03_0615 - 22761375-22761760,22762218-22765026
          Length = 1064

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 43  LKITFYVKNLNNKMAEDKTINIAIAEDEDFVDPWTVT 153
           L + + + N +  +A  K +++++A  +DF  PWT T
Sbjct: 723 LVVVWILINRSRTLAGKKAMSMSVAGGDDFSHPWTFT 759


>02_05_0235 - 27068516-27069032,27069697-27069788,27070056-27070289,
            27071569-27071676,27071796-27071855,27072368-27072443,
            27072550-27072710,27076919-27076981,27077061-27077148,
            27077568-27078308,27078406-27079033,27079314-27079368,
            27082073-27083527
          Length = 1425

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 172  IDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLR 279
            + +  +++ +GS+ +DD+L    E V G   H LL+
Sbjct: 997  LQHPNIVRYYGSEMVDDKLYIYLEYVSGGSIHKLLQ 1032


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,630,735
Number of Sequences: 37544
Number of extensions: 462863
Number of successful extensions: 946
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)