Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_E02
(790 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 27 0.26
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.9
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 4.3
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 4.3
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 7.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 7.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 9.9
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 26.6 bits (56), Expect = 0.26
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 227 IVYPWRIGCSWRDT-QYWLPKDLSG 298
IVY W SWR T Y++P L+G
Sbjct: 218 IVYSWEQNRSWRITHSYFMPDPLAG 242
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 15 RSPYKWRTGVNVLKKNSVRLAEVWLDD 95
R +K RTGV L S + +W+ D
Sbjct: 71 RLAFKKRTGVETLSVGSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 15 RSPYKWRTGVNVLKKNSVRLAEVWLDD 95
R +K RTGV L S + +W+ D
Sbjct: 71 RLAFKKRTGVETLSVGSEFIKNIWVPD 97
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 15 RSPYKWRTGVNVLKKNSVRLAEVWLDD 95
R +K RTGV L S + +W+ D
Sbjct: 10 RLAFKKRTGVETLSVGSEFIKNIWVPD 36
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 495 PNTKLLKHGSSEKCMAISRNKDKITMETCKESEDRQKWTMENFNAER 635
P+ + L SEK +A + + M+ ++ + +Q+ T NA++
Sbjct: 393 PDLRTLNTLHSEKLLAFKMTEQQQQMQAQQQHQQQQQQTQHVINAQQ 439
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 207 LKNIYPELFIPGESVAHGEI 266
+KNI+P LF+ + HG++
Sbjct: 4 MKNIFPVLFVIINVLLHGQV 23
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.0 bits (47), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 42 VNVLKKNSVRLAEVWLDDYAKYYYQRVGNDKGDYGDV 152
+NV +KN + + VWL Y ++ D+ DYG +
Sbjct: 64 INVNEKNQIMKSNVWLRFIWTDY--QLQWDEADYGGI 98
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 102 KYYYQRVGNDKGDYGDVS 155
+YY +R+ ND G+ VS
Sbjct: 268 RYYLERLSNDMGEVSYVS 285
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 102 KYYYQRVGNDKGDYGDVS 155
+YY +R+ ND G+ VS
Sbjct: 268 RYYLERLSNDMGEVSYVS 285
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 7.5
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -2
Query: 459 DKGTIQHRARNSPSKFHRDVSLRFSNTSSTDFLPVGG 349
D+G +NS FHR S F N L V G
Sbjct: 209 DRGDALIIYQNSDDSFHRLTSKTFDNDLRYSELAVAG 245
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 357 VGGTGKVRLAYGDLTCGLE 301
+GG ++LA GD CG E
Sbjct: 633 LGGERLLKLAQGDEMCGQE 651
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 254 SWRDTQYWLPKDLS 295
SWRD++ LP+++S
Sbjct: 60 SWRDSRLRLPENMS 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,617
Number of Sequences: 438
Number of extensions: 5187
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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