Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_D20
(843 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.094
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 3.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 8.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.1
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.3 bits (60), Expect = 0.094
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -3
Query: 544 YVWVCRNH-IFKVVKSTIKLSCIINF 470
Y+W+ ++ I +VK T+KLSC +NF
Sbjct: 142 YLWLYKDKTILYMVKLTLKLSCAMNF 167
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 344 KILKVLTQKLLLKISQYNSNGN 409
KI+ L+ + IS YN+N N
Sbjct: 80 KIISSLSNNYISNISNYNNNNN 101
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 344 KILKVLTQKLLLKISQYNSNGN 409
KI+ L+ + IS YN+N N
Sbjct: 318 KIISSLSNNYISNISNYNNNNN 339
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 530 PKPHFQSCKEYNKIELHHKLPTNESS 453
P F S + Y+ LHH + ESS
Sbjct: 425 PSQRFASGRYYSAYSLHHVRSSRESS 450
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 105 YNTNYKKLQYYN 116
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 782 YRSNYLKLQFYS 747
Y +NY KLQ+Y+
Sbjct: 101 YNTNYKKLQYYN 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,622
Number of Sequences: 438
Number of extensions: 3812
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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