Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_D14
(490 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 196 2e-49
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 165 6e-40
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 149 4e-35
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 141 9e-33
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 136 3e-31
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 134 1e-30
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 130 1e-29
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 120 1e-26
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 119 3e-26
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 114 9e-25
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 113 2e-24
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 98 8e-20
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 93 4e-18
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 92 5e-18
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 90 3e-17
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 89 5e-17
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 87 2e-16
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 84 1e-15
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 83 3e-15
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 78 9e-14
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 77 2e-13
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 77 2e-13
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 77 2e-13
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 77 3e-13
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 71 1e-11
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 71 1e-11
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 71 1e-11
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 71 1e-11
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 69 7e-11
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 67 2e-10
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 66 4e-10
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 63 3e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 58 1e-07
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 51 2e-05
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 40 0.039
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 2.6
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 4.5
UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 32 7.9
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 32 7.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 196 bits (478), Expect = 2e-49
Identities = 93/108 (86%), Positives = 101/108 (93%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS Q
Sbjct: 79 IKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQ 138
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 326
KDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 139 KDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 165 bits (400), Expect = 6e-40
Identities = 79/107 (73%), Positives = 91/107 (85%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S Q
Sbjct: 81 IKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQ 140
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 323
KDELI+EGN +E VS+SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 141 KDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 149 bits (360), Expect = 4e-35
Identities = 70/110 (63%), Positives = 85/110 (77%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
+ GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K
Sbjct: 80 ITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKV 139
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 332
KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 140 KDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 141 bits (341), Expect = 9e-33
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 189 ELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 323
E+I+EGNSLE+VS SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 141 EIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 136 bits (328), Expect = 3e-31
Identities = 58/107 (54%), Positives = 80/107 (74%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
+ GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K
Sbjct: 97 ITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKA 156
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 323
KDE+++ GNSLE +S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 157 KDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 134 bits (324), Expect = 1e-30
Identities = 62/108 (57%), Positives = 79/108 (73%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GVT GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ Q
Sbjct: 141 IKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQ 200
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 326
KD++++EGN ++ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 201 KDQVLVEGNDIDLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 130 bits (315), Expect = 1e-29
Identities = 64/112 (57%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP 176
+ GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S
Sbjct: 79 ITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFST 138
Query: 177 KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 332
KDE+++ GNS+EDVS +AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 139 NVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 120 bits (290), Expect = 1e-26
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = +3
Query: 6 QGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 185
+GVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 186 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
DELI+ G S+EDVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 138 DELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 119 bits (287), Expect = 3e-26
Identities = 58/110 (52%), Positives = 75/110 (68%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
+ GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV V
Sbjct: 89 ITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLG 146
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 332
KDE+ +EGN +E VS SAA I + V+NKDIR+FLDG+YVSEK + D
Sbjct: 147 KDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLIEND 196
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 114 bits (275), Expect = 9e-25
Identities = 55/105 (52%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NSPK 179
++GVT G+++KM YAHFPI +EI+NFLGEK IR +K PGVT+ N +
Sbjct: 88 IRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNEAE 147
Query: 180 QKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
+K+ L ++GN L +VS + ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 148 EKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 113 bits (272), Expect = 2e-24
Identities = 53/102 (51%), Positives = 72/102 (70%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KD
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKD 141
Query: 189 ELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
E+ + G+ L VS +AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 142 EISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 98.3 bits (234), Expect = 8e-20
Identities = 48/104 (46%), Positives = 66/104 (63%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++ VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V ++
Sbjct: 98 IKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDER 156
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
KD ++IEG SL DVS SA I KN+D R FLDG++V+E+
Sbjct: 157 KDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTER 200
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 92.7 bits (220), Expect = 4e-18
Identities = 49/104 (47%), Positives = 70/104 (67%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV +
Sbjct: 79 IKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVR 133
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
E+I+EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 134 GQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 92.3 bits (219), Expect = 5e-18
Identities = 53/107 (49%), Positives = 70/107 (65%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GV+ GF+YK+R+VYAHFP+N V +M GV S Q
Sbjct: 46 IKGVSLGFRYKVRSVYAHFPLNVV----------------------QMRTGVACSVSQAQ 83
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 323
KDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVSEK T+
Sbjct: 84 KDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEKGTM 130
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 89.8 bits (213), Expect = 3e-17
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPK 179
+ GVT G++YKM VY+HFPI +E + F+G K + V GV + N
Sbjct: 87 ITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESV 146
Query: 180 QKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 305
KDE+ IEG +LEDVS I Q T +K+KD+RKFLDG+YV
Sbjct: 147 AKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 89.0 bits (211), Expect = 5e-17
Identities = 46/104 (44%), Positives = 69/104 (66%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV +
Sbjct: 79 IKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVK 133
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
E+ +EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 134 GSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 87.0 bits (206), Expect = 2e-16
Identities = 46/103 (44%), Positives = 68/103 (66%)
Frame = +3
Query: 6 QGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 185
+GV G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ +
Sbjct: 64 EGVGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KG 118
Query: 186 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
+++I+ G+ L DVS +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 119 EDVIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 84.2 bits (199), Expect = 1e-15
Identities = 43/104 (41%), Positives = 66/104 (63%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
+ GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S +
Sbjct: 97 ITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ- 153
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
++ + G +E+ +AA ++Q+T +K KD R F DG+Y+ +K
Sbjct: 154 --DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 83.0 bits (196), Expect = 3e-15
Identities = 44/104 (42%), Positives = 66/104 (63%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GV G++Y+M+ VY+HFPI + +GN + EI NFLGEK R K+ GVTV
Sbjct: 75 IRGVADGYEYRMKVVYSHFPIQ-LKQQGNRL-EITNFLGEKQPRIAKIIEGVTVKIG--- 129
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
DE+ I G E V ++AA I+ +T + +D R F DG+Y++E+
Sbjct: 130 NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 78.2 bits (184), Expect = 9e-14
Identities = 44/103 (42%), Positives = 64/103 (62%)
Frame = +3
Query: 6 QGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 185
+G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +
Sbjct: 82 EGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGE 137
Query: 186 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
D +++ G D++ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 138 D-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 77.4 bits (182), Expect = 2e-13
Identities = 45/102 (44%), Positives = 64/102 (62%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G T V +
Sbjct: 79 GVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVKV--SGN 133
Query: 189 ELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
E+++ G + EDV +AA I+Q T +K D R F DG+Y+ +K
Sbjct: 134 EIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 77.4 bits (182), Expect = 2e-13
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTIH-GDTDVEI--DGE 130
Query: 189 ELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
EL + G +E V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 131 ELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/110 (33%), Positives = 68/110 (61%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
+ G G++Y ++ + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V +
Sbjct: 82 ITGTINGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VK 136
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 332
+++++EG+ + +V+ +AA I+ ST + D R F DG+Y+ +K + L+
Sbjct: 137 GEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 76.6 bits (180), Expect = 3e-13
Identities = 36/102 (35%), Positives = 58/102 (56%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 189 ELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
E+I+ +E + ++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 143 EIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 71.3 bits (167), Expect = 1e-11
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 146
++GVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 79 IKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Frame = +3
Query: 6 QGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG--VTVVNSPK 179
+GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P V +
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQMT-VTNLFGEK-VPRVAALPWSPAEVEVKVQ 136
Query: 180 QKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
K ++ + G E V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 137 NKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/104 (37%), Positives = 66/104 (63%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++G+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ +
Sbjct: 78 VKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VK 132
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
D L + G S +DV +AA I+++T +K D R F DG+Y+ K
Sbjct: 133 GDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 70.9 bits (166), Expect = 1e-11
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 6 QGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQ 182
+GVT+G +YK++ VY+HFP + + I NF+GE R ++ P T V Q
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQ 154
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 314
++I+ G E V +AA ++Q+T +K++D R F DG+Y+ EK
Sbjct: 155 GQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 68.5 bits (160), Expect = 7e-11
Identities = 36/101 (35%), Positives = 60/101 (59%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 182
++GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V +
Sbjct: 78 IEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVK 132
Query: 183 KDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 305
D + I G + +AA I+++T +++ D R F DG+++
Sbjct: 133 GDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 67.3 bits (157), Expect = 2e-10
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKD 135
Query: 189 ELIIEGNSLEDVSSSAALIQQSTTVKNK 272
++I+EG L+ V+ +AA I +T ++ K
Sbjct: 136 DVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 66.1 bits (154), Expect = 4e-10
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGVTV-VNS 173
L+GV F Y+++ Y HFP+ V EGN +I + NFLGEK I+ + V V +
Sbjct: 78 LEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIEQ 135
Query: 174 PKQKDELIIEGNSLEDVSSSAALIQQSTTV--KNKDIRKFLDGLYVSEK 314
K + E+++E E A++I+QST K KD R+F DG+++ K
Sbjct: 136 NKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 63.7 bits (148), Expect = 2e-09
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = -3
Query: 326 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 147
+N R I TIQE +DIL+ D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 146 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFS 15
S+ F TQE++ N +T+ + VN E+ I+ +HLV FS
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFS 126
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 9 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 188
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 189 ELIIEGNSLEDVSSSAALIQQST 257
+++IEG E VS+ AA +Q +T
Sbjct: 141 DIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +3
Query: 21 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 197
GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V S QK+EL+
Sbjct: 33 GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAFYASQAQKNELM 91
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 3 LQGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 116
+ GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 142 ITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 39.5 bits (88), Expect = 0.039
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 153 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIR 281
GV + ++K+ LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 2.6
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 207 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 296
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -3
Query: 326 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQR 210
+N+C LR IK + L+ +L + SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRLL--EESRLTNSLSRLRDVFKK 61
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 159 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 284
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 206
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 141 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTT 320
K A G +V + ++KDE++I+G+ LE+V + + +KN + + +D +K T
Sbjct: 134 KFATGCSVSKNAEKKDEIVIQGDVLEEVEKYIHSLLEEKGLKNVKL-EIIDSQKKKKKPT 192
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 21 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 128
G +YK +YA + + +T +GNS+ E+ FLG+KY
Sbjct: 86 GSRYKTTVIYAPYLL-LITRDGNSL-EVAKFLGKKY 119
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 31.9 bits (69), Expect = 7.9
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +3
Query: 87 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 266
+SI + NF +K+ R V + PGV V +S + KDE G DV + +Q T+
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPG----DVVIKDGIWKQGKTIF 106
Query: 267 N 269
N
Sbjct: 107 N 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,818,926
Number of Sequences: 1657284
Number of extensions: 5972409
Number of successful extensions: 15668
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 15349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15643
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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