Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D08
         (833 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    27   0.53 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.8  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   3.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.0  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   6.6  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 445 VIPSLSLTP--GFPSSLRTMCSRIMKMKKYGHDCLKKFGTSSF 323
           ++PS S  P  G PS      +  MKM ++  + +  FGT+SF
Sbjct: 523 IVPSRSCGPFRGLPSVWDRAIAAFMKMPQFFQNVIFYFGTASF 565


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 478 PHSWKIPCDILVIPSLSLTPGFPSSLRTMC 389
           P  WK    ++++P    +PG PSS R +C
Sbjct: 475 PQPWKKQ-RLVLLPKPGKSPGEPSSFRPIC 503


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 478 PHSWKIPCDILVIPSLSLTPGFPSSLRTMC 389
           P  WK    ++++P     PG PSS R +C
Sbjct: 470 PEQWKKQ-RLVLLPKPGKPPGDPSSFRPIC 498


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 478 PHSWKIPCDILVIPSLSLTPGFPSSLRTMC 389
           P  WK    +++IP  +  PG P S+R +C
Sbjct: 450 PDEWKRQ-RLVLIPKPNKPPGEPGSVRPIC 478


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 484 ILPHSWKIPCDILVIPSLSLTPGFPSSLRTMC 389
           + P +WK    +L IP     PG   S R +C
Sbjct: 452 VFPDNWKKQRLVLSIPKPGKRPGESGSSRPIC 483


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 537 RLVELPWDSTLTWYAAALGVDFCY 608
           +L+E+  D+T +WY     +D  Y
Sbjct: 647 KLIEVVPDTTTSWYLTGFSIDPVY 670


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,116
Number of Sequences: 2352
Number of extensions: 19636
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)