Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D07
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.71 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.7  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 569 PEDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRHAASEPARP 715
           PE   +  F  R  +   Q   Q+N ++ R TT P  +    AS  A P
Sbjct: 167 PESRVQVWFKNRRAKCRQQLQQQQNKSASRTTTSPTKVKASKASPAAAP 215


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 572 EDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPR 676
           +DPG  +  T  G  P QP +    A       PR
Sbjct: 2   DDPGRMMGHTGGGLMPPQPYMNAQDAPAGGENEPR 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,259
Number of Sequences: 336
Number of extensions: 3873
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)