Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D07
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    26   1.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   3.6  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   4.8  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    24   4.8  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.3  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.3  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.3  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.3  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 638 RNFASCRETTRPRP-LHRHAASEPARPDDHVLTTAE-VHD 751
           R+F  C+ET  P P ++    +EP +  D + + ++ +HD
Sbjct: 63  RHFCECKETREPLPYMYACPGTEPCQSSDRLGSCSKSMHD 102


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 541 HGITQRAAEPRGSRGGGVRHSMRSIPAPAIP 633
           H ++  A EP G  GG        +P P  P
Sbjct: 63  HALSHHAGEPSGGGGGRAGSDEDELPQPRQP 93


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = -1

Query: 749 REPRQ*LRRDHQAVQVQMQRGDGGDVDASFRDSWRSFFAGMAGAGIDRIECRTPPPRDPR 570
           +E ++  +R  + ++ QM++          RD   S  A   G G      R PP   PR
Sbjct: 153 QEEKEEAKRREEKLEAQMEKLAAAH--QRDRDVLNSLLAAKVGGGQPSASPRQPPTPLPR 210

Query: 569 GSAAR 555
            S+A+
Sbjct: 211 RSSAQ 215


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = -1

Query: 728 RRDHQAVQVQMQRGDGGDVDASFRDSWRSFFAGMAGAGIDRIECRTPPPRDPRGSAARCV 549
           R+DH    +    GDG + D    D+  S FAG  G    R+  R+  P   R S  + +
Sbjct: 24  RQDHPIYTLSHPGGDGIETDGDIDDT-LSEFAG--GWYTPRLR-RSSRPSSMRASTMKKL 79

Query: 548 IPWL 537
             WL
Sbjct: 80  NEWL 83


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 520 IGDERMSHGITQRAAEPRGSRGGG 591
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 520 IGDERMSHGITQRAAEPRGSRGGG 591
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 520 IGDERMSHGITQRAAEPRGSRGGG 591
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 520 IGDERMSHGITQRAAEPRGSRGGG 591
           IGDE+ SH ++        S GGG
Sbjct: 202 IGDEQQSHAVSPNQRGFSASGGGG 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,536
Number of Sequences: 2352
Number of extensions: 18368
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)