Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D07
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124987-1|BAC86016.1|  295|Homo sapiens protein ( Homo sapiens ...    32   2.8  
BX511262-35|CAM45826.1|  228|Homo sapiens casein kinase 2 beta p...    31   6.4  
AL805934-37|CAI18524.1|  228|Homo sapiens casein kinase 2, beta ...    31   6.4  
AL670886-28|CAI17801.1|  228|Homo sapiens casein kinase 2, beta ...    31   6.4  
AL662899-12|CAI18394.1|  228|Homo sapiens casein kinase 2, beta ...    31   6.4  

>AK124987-1|BAC86016.1|  295|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42997 fis, clone BRTHA2011351. ).
          Length = 295

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 518 ILVMRG*AMESRSAPPSPED-P-GEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRH 691
           +L MRG   +SR+  P P   P G+ V+       P   +L+++       + P P  R 
Sbjct: 151 LLAMRGLGQQSRAPFPGPPQLPLGQRVWGLIFNPLPAPEALEKSRTQDSSDSAPLPARRF 210

Query: 692 AASEPARPD 718
             + PA+PD
Sbjct: 211 LLTRPAQPD 219


>BX511262-35|CAM45826.1|  228|Homo sapiens casein kinase 2 beta
           polypeptide protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 569 PEDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRHAASEPARPDDHVL 730
           P+ P      + C R+P  P L R    CR   R R ++ H    P   D H+L
Sbjct: 176 PKRPANQFVPSSCSRHPDVPLLPRRRPFCRMHFRLREVY-HQQLIPVHGDHHLL 228


>AL805934-37|CAI18524.1|  228|Homo sapiens casein kinase 2, beta
           polypeptide protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 569 PEDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRHAASEPARPDDHVL 730
           P+ P      + C R+P  P L R    CR   R R ++ H    P   D H+L
Sbjct: 176 PKRPANQFVPSSCSRHPDVPLLPRRRPFCRMHFRLREVY-HQQLIPVHGDHHLL 228


>AL670886-28|CAI17801.1|  228|Homo sapiens casein kinase 2, beta
           polypeptide protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 569 PEDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRHAASEPARPDDHVL 730
           P+ P      + C R+P  P L R    CR   R R ++ H    P   D H+L
Sbjct: 176 PKRPANQFVPSSCSRHPDVPLLPRRRPFCRMHFRLREVY-HQQLIPVHGDHHLL 228


>AL662899-12|CAI18394.1|  228|Homo sapiens casein kinase 2, beta
           polypeptide protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 569 PEDPGEAVFDTRCGRYPHQPSLQRNFASCRETTRPRPLHRHAASEPARPDDHVL 730
           P+ P      + C R+P  P L R    CR   R R ++ H    P   D H+L
Sbjct: 176 PKRPANQFVPSSCSRHPDVPLLPRRRPFCRMHFRLREVY-HQQLIPVHGDHHLL 228


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,233,028
Number of Sequences: 237096
Number of extensions: 2450191
Number of successful extensions: 5832
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5820
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)