Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D07
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical p...    29   3.9  
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    29   5.1  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    29   5.1  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    29   5.1  

>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
           protein K10D2.3 protein.
          Length = 1425

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 526 DERMSHGITQRAAEPRGSRGGGVRHS--MRSIPAPAIPAKKLRQLSRNDASTSPP 684
           DE+ S G  +R     G RGG  ++S   RS  +PA  A   ++ SRN +   PP
Sbjct: 3   DEQRS-GSRRRGGALGGGRGGNSQNSGRKRSSNSPADSASSSQKTSRNPSQNRPP 56


>Z98866-26|CAM33505.1|  559|Caenorhabditis elegans Hypothetical
           protein Y49E10.29 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 538 SHGITQRAAEPRGSRGGGVRHSM-RSIPAPAIPAKKLRQLSRNDASTSPPSP 690
           S   TQ   +P   +   V+ +  +  P+PA PA+K + +++  AS  P SP
Sbjct: 392 SQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSP 443


>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
           protein C11E4.6 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 458 SSHSN-KYFKQNNAT*HVIRYILVMRG*AMESRSAPPSPEDPGEAVFDTRCGR 613
           + H N  Y K NN T   I    VMR  +  S  +PPSP      +FD  CG+
Sbjct: 638 NQHLNGNYEKDNNVT--AIFLEDVMRP-SSNSAESPPSPNTSKAFIFDALCGK 687


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 710 VQVQMQRGDGGDVDASFRDSWRSFFAGMAGAGI 612
           V+++  R  GG  DASF   W      +AG GI
Sbjct: 218 VEIRFHRPSGGPFDASFAIIWMISMTCVAGGGI 250


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 710 VQVQMQRGDGGDVDASFRDSWRSFFAGMAGAGI 612
           V+++  R  GG  DASF   W      +AG GI
Sbjct: 218 VEIRFHRPSGGPFDASFAIIWMISMTCVAGGGI 250


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 710 VQVQMQRGDGGDVDASFRDSWRSFFAGMAGAGI 612
           V+++  R  GG  DASF   W      +AG GI
Sbjct: 218 VEIRFHRPSGGPFDASFAIIWMISMTCVAGGGI 250


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,851,770
Number of Sequences: 27780
Number of extensions: 378183
Number of successful extensions: 1095
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)