Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_D03
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 403 e-113
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 365 e-101
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 7.5
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 403 bits (992), Expect = e-113
Identities = 188/256 (73%), Positives = 210/256 (82%), Gaps = 1/256 (0%)
Frame = +3
Query: 99 MTXIIWDXXXXXXXXPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATIT 278
MT IIWD P++D+ +H +DLG+E+RD TDDQVTID A A KYNV +KCATIT
Sbjct: 19 MTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCATIT 78
Query: 279 PDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAHAD 458
PDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV W KPIIIGRHAHAD
Sbjct: 79 PDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAHAD 138
Query: 459 QYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFK 635
QYKATDFVVPGAG LEI F G + I+ V ++KG GV+L+M+NTD SI DFAH+SFK
Sbjct: 139 QYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSIRDFAHASFK 198
Query: 636 FALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYXKQFEDAGIWYEHRLIDDMVAYA 815
+AL RK+PLYLSTKNTILKKYDGRFKDIF +IY EY +F+ AGIWYEHRLIDDMVA A
Sbjct: 199 YALQRKFPLYLSTKNTILKKYDGRFKDIFAEIYP-EYEAEFKAAGIWYEHRLIDDMVAQA 257
Query: 816 MKSXGGFVWACKNYDG 863
MKS GGFVWACKNYDG
Sbjct: 258 MKSDGGFVWACKNYDG 273
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 365 bits (899), Expect = e-101
Identities = 166/256 (64%), Positives = 199/256 (77%), Gaps = 1/256 (0%)
Frame = +3
Query: 99 MTXIIWDXXXXXXXXPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATIT 278
MT IIW P+LD+++ YDLG+E RD+T+DQVTID A AI +++VGIKCATIT
Sbjct: 41 MTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCATIT 100
Query: 279 PDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAHAD 458
PDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW +PI IGRHA D
Sbjct: 101 PDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAFGD 160
Query: 459 QYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVALAMFNTDASIIDFAHSSFK 635
QYK TD V+P TL+++ G H V+++ K GV LAM+NTD SI FAHS F+
Sbjct: 161 QYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESIKGFAHSCFQ 220
Query: 636 FALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYXKQFEDAGIWYEHRLIDDMVAYA 815
+AL +++PLYLSTKNTILKKYDGRFKDIFQDIY+++Y F++ IWYEHRLIDD VA A
Sbjct: 221 YALMKQWPLYLSTKNTILKKYDGRFKDIFQDIYEKKYEADFKNNKIWYEHRLIDDQVAQA 280
Query: 816 MKSXGGFVWACKNYDG 863
+KS GGFVWACKNYDG
Sbjct: 281 LKSSGGFVWACKNYDG 296
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 144 PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 323
P +D V ++ R + + + KK+ + T+ PDE+ VE KL K
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233
Query: 324 KSPNGTIRNI 353
+ PN T+R +
Sbjct: 2234 RLPNATLREV 2243
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -1
Query: 302 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 183
F+NSL I S TF +F+ STI+ + +I LI IFH
Sbjct: 59 FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93
>U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical
protein T08A9.13 protein.
Length = 120
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 183 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 317
++ + + + ++C +A+ +Y+V K T+T E++ E KK
Sbjct: 44 LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 453 ADQYKATDFVVPGAGTLEIIFKPESGE-AIKHVVHEYKGAGVALAMFNTDASI 608
ADQY+ ++ T II+ G+ A+K V ++YK G+++ NT+ +
Sbjct: 650 ADQYERLTHIIIDCST--IIYVDLMGQGALKDVYNDYKTIGISVLFANTNEHV 700
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,138,555
Number of Sequences: 27780
Number of extensions: 415547
Number of successful extensions: 1066
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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