Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D02
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   3.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.7  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 719 KRMLPDRIKITQINCTSSNR 660
           KR+LPD +K +   CT   +
Sbjct: 63  KRVLPDALKTSCAKCTDKQK 82


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 728 LNYKRMLPDRIKITQINCTSSNRT 657
           ++ KR+LP+ ++     CT   RT
Sbjct: 58  VDLKRVLPEALQTNCAKCTEKQRT 81


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 564 SFIIQCLSMNRFH 602
           SFI+ C+S++RF+
Sbjct: 141 SFILVCISVDRFY 153


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 564 SFIIQCLSMNRFH 602
           SFI+ C+S++RF+
Sbjct: 141 SFILVCISVDRFY 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,155
Number of Sequences: 336
Number of extensions: 2640
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)