Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_D02
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   5.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   7.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.8  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 698 SDLVTFFCNSAIRFI*DYCSRS 763
           SDLVTF C  ++  + D   RS
Sbjct: 306 SDLVTFLCYPSVMNLDDLTRRS 327


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 698 SDLVTFFCNSAIRFI*DYCSRS 763
           SDLVTF C  ++  + D   RS
Sbjct: 306 SDLVTFLCYPSVMNLDDLTRRS 327


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = +3

Query: 564 SFIIQCLSMNRFH 602
           SF++ C+SM+R++
Sbjct: 126 SFVLVCISMDRYY 138


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 374 RTNLFTASRCFETIXVS*NGVYNC 445
           RT L  +    E + +  NG+Y C
Sbjct: 287 RTRLLGSVLALEAVTLEDNGIYRC 310


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 374 RTNLFTASRCFETIXVS*NGVYNC 445
           RT L  +    E + +  NG+Y C
Sbjct: 287 RTRLLGSVLALEAVTLEDNGIYRC 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,591
Number of Sequences: 438
Number of extensions: 3592
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)