Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C24
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein. 337 2e-92
BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec... 337 2e-92
AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec... 337 2e-92
AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens ... 337 2e-92
BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec... 336 8e-92
BC121023-1|AAI21024.1| 612|Homo sapiens component of oligomeric... 36 0.14
BC121022-1|AAI21023.1| 612|Homo sapiens component of oligomeric... 36 0.14
BC017492-1|AAH17492.1| 219|Homo sapiens COG8 protein protein. 36 0.14
AK056344-1|BAB71157.1| 612|Homo sapiens protein ( Homo sapiens ... 36 0.14
AK025968-1|BAB15301.1| 219|Homo sapiens protein ( Homo sapiens ... 36 0.25
>EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein.
Length = 513
Score = 337 bits (829), Expect = 2e-92
Identities = 163/222 (73%), Positives = 187/222 (84%)
Frame = +3
Query: 189 MSIEIESADVIRLIQQYLKESNXXXXXXXXXXXXGVTLNTVDSVDGFCADINNGHWDTVL 368
MSIEIES+DVIRLI QYLKE++ V+LNTVDS++ F ADIN+GHWDTVL
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 369 KATASLKLPDKKLMELYEQVVLELIELRELGAARSLLRQTHPCLLMKQHETDRYMHLENL 548
+A SLKLPDK L++LYEQVVLELIELRELGAARSLLRQT P +++KQ + +RY+HLENL
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 549 LARSYFDPREAYGSGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP 728
LARSYFDPREAY G KE+RRAAIA +LAGEVSVVP SRL+ALLGQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 729 GTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGXKSHVECARF 854
G TIDLFRGKAA++D E++ PTQLS+ IKFG KSHVECARF
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARF 222
>BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 337 bits (829), Expect = 2e-92
Identities = 163/222 (73%), Positives = 187/222 (84%)
Frame = +3
Query: 189 MSIEIESADVIRLIQQYLKESNXXXXXXXXXXXXGVTLNTVDSVDGFCADINNGHWDTVL 368
MSIEIES+DVIRLI QYLKE++ V+LNTVDS++ F ADIN+GHWDTVL
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 369 KATASLKLPDKKLMELYEQVVLELIELRELGAARSLLRQTHPCLLMKQHETDRYMHLENL 548
+A SLKLPDK L++LYEQVVLELIELRELGAARSLLRQT P +++KQ + +RY+HLENL
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 549 LARSYFDPREAYGSGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP 728
LARSYFDPREAY G KE+RRAAIA +LAGEVSVVP SRL+ALLGQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 729 GTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGXKSHVECARF 854
G TIDLFRGKAA++D E++ PTQLS+ IKFG KSHVECARF
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARF 222
>AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 337 bits (829), Expect = 2e-92
Identities = 163/222 (73%), Positives = 187/222 (84%)
Frame = +3
Query: 189 MSIEIESADVIRLIQQYLKESNXXXXXXXXXXXXGVTLNTVDSVDGFCADINNGHWDTVL 368
MSIEIES+DVIRLI QYLKE++ V+LNTVDS++ F ADIN+GHWDTVL
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 369 KATASLKLPDKKLMELYEQVVLELIELRELGAARSLLRQTHPCLLMKQHETDRYMHLENL 548
+A SLKLPDK L++LYEQVVLELIELRELGAARSLLRQT P +++KQ + +RY+HLENL
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 549 LARSYFDPREAYGSGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP 728
LARSYFDPREAY G KE+RRAAIA +LAGEVSVVP SRL+ALLGQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 729 GTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGXKSHVECARF 854
G TIDLFRGKAA++D E++ PTQLS+ IKFG KSHVECARF
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARF 222
>AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ10805 fis, clone NT2RP4000839, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 513
Score = 337 bits (829), Expect = 2e-92
Identities = 163/222 (73%), Positives = 187/222 (84%)
Frame = +3
Query: 189 MSIEIESADVIRLIQQYLKESNXXXXXXXXXXXXGVTLNTVDSVDGFCADINNGHWDTVL 368
MSIEIES+DVIRLI QYLKE++ V+LNTVDS++ F ADIN+GHWDTVL
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 369 KATASLKLPDKKLMELYEQVVLELIELRELGAARSLLRQTHPCLLMKQHETDRYMHLENL 548
+A SLKLPDK L++LYEQVVLELIELRELGAARSLLRQT P +++KQ + +RY+HLENL
Sbjct: 61 QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 549 LARSYFDPREAYGSGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP 728
LARSYFDPREAY G KE+RRAAIA +LAGEVSVVP SRL+ALLGQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 729 GTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGXKSHVECARF 854
G TIDLFRGKAA++D E++ PTQLS+ IKFG KSHVECARF
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARF 222
>BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 336 bits (825), Expect = 8e-92
Identities = 162/222 (72%), Positives = 186/222 (83%)
Frame = +3
Query: 189 MSIEIESADVIRLIQQYLKESNXXXXXXXXXXXXGVTLNTVDSVDGFCADINNGHWDTVL 368
MSIEIES+DVIRLI QYLKE++ V+LNTVDS++ F ADIN+GHWDTVL
Sbjct: 1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL 60
Query: 369 KATASLKLPDKKLMELYEQVVLELIELRELGAARSLLRQTHPCLLMKQHETDRYMHLENL 548
+ SLKLPDK L++LYEQVVLELIELRELGAARSLLRQT P +++KQ + +RY+HLENL
Sbjct: 61 QVIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL 120
Query: 549 LARSYFDPREAYGSGGGKERRRAAIAASLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP 728
LARSYFDPREAY G KE+RRAAIA +LAGEVSVVP SRL+ALLGQALKWQQHQGLLPP
Sbjct: 121 LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP 180
Query: 729 GTTIDLFRGKAAIRDQEDDLCPTQLSKIIKFGXKSHVECARF 854
G TIDLFRGKAA++D E++ PTQLS+ IKFG KSHVECARF
Sbjct: 181 GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARF 222
>BC121023-1|AAI21024.1| 612|Homo sapiens component of oligomeric
golgi complex 8 protein.
Length = 612
Score = 36.3 bits (80), Expect = 0.14
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -2
Query: 388 LSEAVALSTVSQWPLLISAQKPSTLST--VFRVTPVSSCKVCNVLVKFDSFKYCC-ISLI 218
L A A+ S P + A +P TL V P +C + N+LV F+ + CC ++L
Sbjct: 399 LISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALA 458
Query: 217 TSADSISMDIVYK-TSFIRSYHR 152
D + K T I ++HR
Sbjct: 459 QDVTGALEDALAKVTKIILAFHR 481
>BC121022-1|AAI21023.1| 612|Homo sapiens component of oligomeric
golgi complex 8 protein.
Length = 612
Score = 36.3 bits (80), Expect = 0.14
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -2
Query: 388 LSEAVALSTVSQWPLLISAQKPSTLST--VFRVTPVSSCKVCNVLVKFDSFKYCC-ISLI 218
L A A+ S P + A +P TL V P +C + N+LV F+ + CC ++L
Sbjct: 399 LISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALA 458
Query: 217 TSADSISMDIVYK-TSFIRSYHR 152
D + K T I ++HR
Sbjct: 459 QDVTGALEDALAKVTKIILAFHR 481
>BC017492-1|AAH17492.1| 219|Homo sapiens COG8 protein protein.
Length = 219
Score = 36.3 bits (80), Expect = 0.14
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -2
Query: 388 LSEAVALSTVSQWPLLISAQKPSTLST--VFRVTPVSSCKVCNVLVKFDSFKYCC-ISLI 218
L A A+ S P + A +P TL V P +C + N+LV F+ + CC ++L
Sbjct: 6 LISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALA 65
Query: 217 TSADSISMDIVYK-TSFIRSYHR 152
D + K T I ++HR
Sbjct: 66 QDVTGALEDALAKVTKIILAFHR 88
>AK056344-1|BAB71157.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ31782 fis, clone NT2RI2008336, highly similar to
Homo sapiens component of oligomeric golgi complex 8
(COG8), ).
Length = 612
Score = 36.3 bits (80), Expect = 0.14
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -2
Query: 388 LSEAVALSTVSQWPLLISAQKPSTLST--VFRVTPVSSCKVCNVLVKFDSFKYCC-ISLI 218
L A A+ S P + A +P TL V P +C + N+LV F+ + CC ++L
Sbjct: 399 LISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALA 458
Query: 217 TSADSISMDIVYK-TSFIRSYHR 152
D + K T I ++HR
Sbjct: 459 QDVTGALEDALAKVTKIILAFHR 481
>AK025968-1|BAB15301.1| 219|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22315 fis, clone HRC05256. ).
Length = 219
Score = 35.5 bits (78), Expect = 0.25
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = -2
Query: 379 AVALSTVSQWPLLISAQKPSTLST--VFRVTPVSSCKVCNVLVKFDSFKYCC-ISLITSA 209
A A+ S P + A +P TL V P +C + N+LV F+ + CC ++L
Sbjct: 9 APAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALAQDV 68
Query: 208 DSISMDIVYK-TSFIRSYHR 152
D + K T I ++HR
Sbjct: 69 TGALEDALAKVTKIILAFHR 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,231,767
Number of Sequences: 237096
Number of extensions: 2852057
Number of successful extensions: 10843
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10837
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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