BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C23
(689 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001464-1|AAN71219.1| 178|Drosophila melanogaster GM25447p pro... 176 2e-44
AY071464-1|AAL49086.1| 163|Drosophila melanogaster RE54409p pro... 176 2e-44
AE014297-1965|AAF55148.2| 173|Drosophila melanogaster CG4247-PB... 176 2e-44
AE014297-1964|AAN13636.2| 163|Drosophila melanogaster CG4247-PA... 176 2e-44
>BT001464-1|AAN71219.1| 178|Drosophila melanogaster GM25447p
protein.
Length = 178
Score = 176 bits (429), Expect = 2e-44
Identities = 78/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 264 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 443
DKLY ++E+E+RGIDPAVL SY+WF AA HLGIE K W+ RKA ER TLLK VHIY
Sbjct: 55 DKLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIY 114
Query: 444 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIECQKLPEHLVPP 623
KKH+VQYE+RT+FR+++ +LTGST DT+LEYIERNLPEG AL+ ++ E Q++PEHL P
Sbjct: 115 KKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGVALQASRTELQEIPEHLRQP 174
>AY071464-1|AAL49086.1| 163|Drosophila melanogaster RE54409p
protein.
Length = 163
Score = 176 bits (429), Expect = 2e-44
Identities = 78/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 264 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 443
DKLY ++E+E+RGIDPAVL SY+WF AA HLGIE K W+ RKA ER TLLK VHIY
Sbjct: 40 DKLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIY 99
Query: 444 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIECQKLPEHLVPP 623
KKH+VQYE+RT+FR+++ +LTGST DT+LEYIERNLPEG AL+ ++ E Q++PEHL P
Sbjct: 100 KKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGVALQASRTELQEIPEHLRQP 159
>AE014297-1965|AAF55148.2| 173|Drosophila melanogaster CG4247-PB,
isoform B protein.
Length = 173
Score = 176 bits (429), Expect = 2e-44
Identities = 78/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 264 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 443
DKLY ++E+E+RGIDPAVL SY+WF AA HLGIE K W+ RKA ER TLLK VHIY
Sbjct: 50 DKLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIY 109
Query: 444 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIECQKLPEHLVPP 623
KKH+VQYE+RT+FR+++ +LTGST DT+LEYIERNLPEG AL+ ++ E Q++PEHL P
Sbjct: 110 KKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGVALQASRTELQEIPEHLRQP 169
>AE014297-1964|AAN13636.2| 163|Drosophila melanogaster CG4247-PA,
isoform A protein.
Length = 163
Score = 176 bits (429), Expect = 2e-44
Identities = 78/120 (65%), Positives = 97/120 (80%)
Frame = +3
Query: 264 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 443
DKLY ++E+E+RGIDPAVL SY+WF AA HLGIE K W+ RKA ER TLLK VHIY
Sbjct: 40 DKLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIY 99
Query: 444 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIECQKLPEHLVPP 623
KKH+VQYE+RT+FR+++ +LTGST DT+LEYIERNLPEG AL+ ++ E Q++PEHL P
Sbjct: 100 KKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGVALQASRTELQEIPEHLRQP 159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,126,516
Number of Sequences: 53049
Number of extensions: 533636
Number of successful extensions: 1124
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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