Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_C23
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032626-15|CAA21535.1|  156|Caenorhabditis elegans Hypothetical...    87   1e-17
L16621-7|ABA00181.1|  300|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AY081844-1|AAL91661.1|  362|Caenorhabditis elegans heparan 6-O s...    30   1.8  
AC024755-9|AAF59640.2|  362|Caenorhabditis elegans Heparan sulph...    30   1.8  
U41533-11|AAO38614.1|  387|Caenorhabditis elegans Hypothetical p...    27   9.6  
U41533-10|AAA83172.1|  491|Caenorhabditis elegans Hypothetical p...    27   9.6  
U41533-8|AAA83171.2|  588|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ...    27   9.6  

>AL032626-15|CAA21535.1|  156|Caenorhabditis elegans Hypothetical
           protein Y37D8A.18 protein.
          Length = 156

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 47/114 (41%), Positives = 65/114 (57%)
 Frame = +3

Query: 264 DKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERHTLLKCVHIY 443
           DKLY  VE+E RG D AVL SY+ F      HL I   +   L      +  L +   ++
Sbjct: 38  DKLYSSVEIEYRGHDKAVLKSYTSFLQQVCQHLEIPQGRLEVLPYIRWVQPAL-RSKFVH 96

Query: 444 KKHKVQYEIRTYFRFIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIECQKLP 605
           KK+K+ YE RT+   + +  +TGST  T+LEYI+RN+PEG  ++V   E Q LP
Sbjct: 97  KKYKLHYETRTHISKLEILNVTGSTASTFLEYIQRNIPEGVGMRVGFTELQPLP 150


>L16621-7|ABA00181.1|  300|Caenorhabditis elegans Hypothetical
           protein ZK688.10 protein.
          Length = 300

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 517 VDPVSLCICINLKYVRISYCTLCFL*MCTHF 425
           +DPV +C+   L  +  S C L  L +C HF
Sbjct: 192 IDPVVMCVLSILYLIYNSVCLLAVLHLCAHF 222


>AY081844-1|AAL91661.1|  362|Caenorhabditis elegans heparan 6-O
           sulfotransferase HST-6 protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 486 FIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIEC 593
           F+H+Q+  G+T + +L   ++NLP  C     +  C
Sbjct: 83  FVHIQKTAGTTFEKFLVRYQQNLPCKCQAHKKRCNC 118


>AC024755-9|AAF59640.2|  362|Caenorhabditis elegans Heparan
           sulphotransferase protein 6 protein.
          Length = 362

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 486 FIHMQRLTGSTCDTYLEYIERNLPEGCALKVTKIEC 593
           F+H+Q+  G+T + +L   ++NLP  C     +  C
Sbjct: 83  FVHIQKTAGTTFEKFLVRYQQNLPCKCQAHKKRCNC 118


>U41533-11|AAO38614.1|  387|Caenorhabditis elegans Hypothetical
           protein R05F9.1c protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 264 PIPQEEPLVQQHEVAPLYWRIVIELHNLV 178
           P+PQ  PL QQH VA       +  HN V
Sbjct: 305 PLPQPAPLQQQHRVAVFGEAAPLAAHNRV 333


>U41533-10|AAA83172.1|  491|Caenorhabditis elegans Hypothetical
           protein R05F9.1a protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 264 PIPQEEPLVQQHEVAPLYWRIVIELHNLV 178
           P+PQ  PL QQH VA       +  HN V
Sbjct: 409 PLPQPAPLQQQHRVAVFGEAAPLAAHNRV 437


>U41533-8|AAA83171.2|  588|Caenorhabditis elegans Hypothetical
           protein R05F9.1b protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 264 PIPQEEPLVQQHEVAPLYWRIVIELHNLV 178
           P+PQ  PL QQH VA       +  HN V
Sbjct: 506 PLPQPAPLQQQHRVAVFGEAAPLAAHNRV 534


>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
           protein Y81G3A.3 protein.
          Length = 1696

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 389 TKESRERKAHTFKMCTHLQETQSAV*NSYILQVYTYAEAHW 511
           TKE++       K   HLQE +    ++  L   TY +AHW
Sbjct: 2   TKENQIVLDERVKENQHLQEEEKLALDAVYLNQITYIKAHW 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,388,499
Number of Sequences: 27780
Number of extensions: 291750
Number of successful extensions: 852
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)