Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C17
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 34 0.13
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 34 0.13
Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical pr... 33 0.18
AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical ... 32 0.40
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 31 1.2
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 31 1.2
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 30 2.2
U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion defec... 30 2.2
U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion defec... 30 2.2
U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion defec... 30 2.2
U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion defec... 30 2.2
AL032630-7|CAA21563.1| 241|Caenorhabditis elegans Hypothetical ... 29 2.9
Z74037-2|CAD36492.1| 441|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74037-1|CAA98492.1| 510|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 29 3.8
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 6.6
U39852-5|AAK39258.1| 410|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 28 6.6
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 28 8.7
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 8.7
U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical pr... 28 8.7
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 596 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHIYEFQTAED 763
++G + FENS FQ EK+ R + S +P + H +E S + + E+
Sbjct: 191 AFGTSF-FENSQKSFQESSEKFHRDLASPLSRTIPVQSAGHFSEVSKYFNSEEEEN 245
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 596 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHIYEFQTAED 763
++G + FENS FQ EK+ R + S +P + H +E S + + E+
Sbjct: 775 AFGTSF-FENSQKSFQESSEKFHRDLASPLSRTIPVQSAGHFSEVSKYFNSEEEEN 829
>Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical
protein B0462.1 protein.
Length = 548
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 473 AEISQNV--ETVHKADELGNIYTDNSEYLNQT-DVLTDVTDHYESYGNDYQFE 622
AE+ N E + DEL N Y S+Y T D++ V D Y+SY N + E
Sbjct: 308 AEVLNNAFDEYNKRMDELHNEYCKKSDYWRHTLDIVYGVQDEYKSYSNQQKAE 360
>AL032635-3|CAB63374.1| 635|Caenorhabditis elegans Hypothetical
protein Y51A2A.5 protein.
Length = 635
Score = 32.3 bits (70), Expect = 0.40
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = +2
Query: 428 SDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGN 607
S+ NIET +D E N +T +K + L ++ TD++ +++ DV D
Sbjct: 333 SNVQKNIETVEMDKVEEECINCDTYNK-EVLNDLVTDSNIIISRFPEDEDVKDKRTFEDK 391
Query: 608 DYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTESSHI 739
D E+ D + D +G ++S + DFH ESS I
Sbjct: 392 D---ESISEMDTVDQKAKDVNLGPPQNSNKHCSKDFHSFESSTI 432
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 425 ESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDH 589
E Q T E + +QN E + +A GN DN +NQ +V +TDH
Sbjct: 73 EQSQKTRAEDQARADQIR-TQNEENLKEAVASGNQLLDNQRIVNQAEVTKRLTDH 126
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 647 DGEKYDRGVGDAESSVVPATTDFHHTESSHI 739
+GE R +G +S ++P + DF TE+SH+
Sbjct: 497 NGEPLIRTIGAPKSGILPTSVDFVSTETSHL 527
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 647 DGEKYDRGVGDAESSVVPATTDFHHTESSHI 739
+GE R +G +S ++P + DF TE+SH+
Sbjct: 497 NGEPLIRTIGAPKSGILPTSVDFVSTETSHL 527
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 491 VETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYES---YGNDYQFENSYNQFQSDGEKY 661
++ V +A + TD SEY + + + D +D YE + + ++E+ +++ + E+
Sbjct: 801 LKLVDRAARKDSDETDESEYYDDEEEIEDESDEYEDEEYWDEEIEYEDE-EEYEYEDEEV 859
Query: 662 DRGVGDAESSVVPATTDFHHTESSHIYEFQTAEDLIXERERE 787
GD E + D ESS + E E L E
Sbjct: 860 LEEYGDEEEEDI----DMKSVESSDVEEESVMEVLEPSESHE 897
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 539 CLYKYFQVHQLCEQFQHFEKFLHMYLSP 456
CL K ++H+ CE+ HF K + Y P
Sbjct: 256 CLIKTMRLHRTCEKLIHFVKCFYTYTEP 283
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Frame = +2
Query: 425 ESDQNTNIETEVIDTYAEIS-----QNVETVHKADELGNIY--TDNSEYLNQTDVLTDVT 583
ES QN +T++ D Y + +H D N Y D ++Q L D+
Sbjct: 166 ESRQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP-DNQPNAYIRADKLYEVSQRHALADLR 224
Query: 584 DHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTES 730
DH ES NSYNQ + G + +SS + +++D H S
Sbjct: 225 DHVESQIMTGNTRNSYNQ-----QPPPMGGLEMQSSPMKSSSDSSHMRS 268
>U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform a protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPAT--TDFHHTESSHIYEFQ 751
V D Y S + Y F+ S F++ + Y GV S + PA+ ++ SH +
Sbjct: 77 VADAYISADDAYYFQRSPTSFEAVFQYYATGVVHRPSEICPASFLSELDFWRISHQHVGS 136
Query: 752 TAEDLIXERERE 787
D+I ++ E
Sbjct: 137 CCADIIPQKREE 148
>U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform b protein.
Length = 490
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPAT--TDFHHTESSHIYEFQ 751
V D Y S + Y F+ S F++ + Y GV S + PA+ ++ SH +
Sbjct: 98 VADAYISADDAYYFQRSPTSFEAVFQYYATGVVHRPSEICPASFLSELDFWRISHQHVGS 157
Query: 752 TAEDLIXERERE 787
D+I ++ E
Sbjct: 158 CCADIIPQKREE 169
>U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform c protein.
Length = 510
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPAT--TDFHHTESSHIYEFQ 751
V D Y S + Y F+ S F++ + Y GV S + PA+ ++ SH +
Sbjct: 118 VADAYISADDAYYFQRSPTSFEAVFQYYATGVVHRPSEICPASFLSELDFWRISHQHVGS 177
Query: 752 TAEDLIXERERE 787
D+I ++ E
Sbjct: 178 CCADIIPQKREE 189
>U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform d protein.
Length = 501
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVVPAT--TDFHHTESSHIYEFQ 751
V D Y S + Y F+ S F++ + Y GV S + PA+ ++ SH +
Sbjct: 109 VADAYISADDAYYFQRSPTSFEAVFQYYATGVVHRPSEICPASFLSELDFWRISHQHVGS 168
Query: 752 TAEDLIXERERE 787
D+I ++ E
Sbjct: 169 CCADIIPQKREE 180
>AL032630-7|CAA21563.1| 241|Caenorhabditis elegans Hypothetical
protein Y62H9A.7 protein.
Length = 241
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 404 TTLVNYGESDQNTNIET--EVIDTYAEISQNVETVHKADELGNIY 532
+T +N+G+ ++N+ E E I +AE + ++ H+ N+Y
Sbjct: 89 STAINHGQPEENSRFEMDDETICLFAEALRRCQSFHETPAFANLY 133
>Z74037-2|CAD36492.1| 441|Caenorhabditis elegans Hypothetical
protein F57B7.1b protein.
Length = 441
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 118 MSSVGCFVSYASCLKKSFRFNLFLKNVNFFHEIHDFVN 5
M C ++ KSF +++F+ NF+H IH +++
Sbjct: 1 MEFTECKTTFIHLPDKSFLYDVFVSVYNFYHPIHAYLS 38
>Z74037-1|CAA98492.1| 510|Caenorhabditis elegans Hypothetical
protein F57B7.1a protein.
Length = 510
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 118 MSSVGCFVSYASCLKKSFRFNLFLKNVNFFHEIHDFVN 5
M C ++ KSF +++F+ NF+H IH +++
Sbjct: 1 MEFTECKTTFIHLPDKSFLYDVFVSVYNFYHPIHAYLS 38
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 476 EISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGNDY 613
E SQ ETV A GN Y + N+ TD + YG+ +
Sbjct: 623 ETSQPSETVETAPANGNDYDEEKSVENKVSTETDAVPNLGEYGSKF 668
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 410 LVNYGESDQNTNIETEVIDTYAEISQNVETVHKADELG-NIYTDNSE--YLNQTDVLTDV 580
L+ + + N + E++DT +++ + + V KA+ + D SE YLN+ VL ++
Sbjct: 39 LIGSIKRETNDEVLVELVDTSRQVTISRDDVQKANPPKFDKIEDMSELTYLNEASVLHNL 98
Query: 581 TDHYES 598
D Y S
Sbjct: 99 KDRYYS 104
>U39852-5|AAK39258.1| 410|Caenorhabditis elegans Hypothetical
protein K10C2.3 protein.
Length = 410
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 590 YESYGNDYQFENSYNQFQSDGEKYDRGVGDAESSVV 697
Y +YGN Y ++N+ FQ K +GD ++ ++
Sbjct: 139 YYAYGNKYTYKNNLGTFQGFDAKDTVVIGDRKTDLI 174
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 584 QLHQ*EHLFG-SSIQNCLYKYFQVHQLCEQFQHFEKFLHMYLSPQFQYLYSDRF 426
+L+Q LF + + + YKY ++H LC +F KF M Y+ DRF
Sbjct: 137 ELYQGAKLFYMTGMMHGQYKYNEIHNLC-RFISVMKFRPMVWKDAHPYVLCDRF 189
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 416 NYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYE 595
N + + + I + I+T QN E HK DE+ +++ SE ++ L E
Sbjct: 296 NRNDLESWSQIRVQEINTQTN-RQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLE 354
Query: 596 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSV 694
Q E+ Q + D Y+ + D ++ V
Sbjct: 355 K-----QLEDLNYQLEDDQRSYEAALNDKDAQV 382
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 416 NYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYE 595
N + + + I + I+T QN E HK DE+ +++ SE ++ L E
Sbjct: 296 NRNDLESWSQIRVQEINTQTN-RQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLE 354
Query: 596 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSV 694
Q E+ Q + D Y+ + D ++ V
Sbjct: 355 K-----QLEDLNYQLEDDQRSYEAALNDKDAQV 382
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 416 NYGESDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYE 595
N + + + I + I+T QN E HK DE+ +++ SE ++ L E
Sbjct: 296 NRNDLESWSQIRVQEINTQTN-RQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLE 354
Query: 596 SYGNDYQFENSYNQFQSDGEKYDRGVGDAESSV 694
Q E+ Q + D Y+ + D ++ V
Sbjct: 355 K-----QLEDLNYQLEDDQRSYEAALNDKDAQV 382
>U49947-7|AAA93425.2| 382|Caenorhabditis elegans Hypothetical
protein C30G4.6 protein.
Length = 382
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = -3
Query: 635 GCKNFQ----TDSHFHMTHNGQLHQ*EHLFGS-SIQN 540
GCKN D HF ++ +LH E+++GS +IQN
Sbjct: 124 GCKNLTGNLLIDDHFDFKNSYKLHDVENIYGSITIQN 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,685,816
Number of Sequences: 27780
Number of extensions: 289288
Number of successful extensions: 899
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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