Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C17
(787 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.80
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 2.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 4.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 7.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 7.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 9.8
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.8
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.0 bits (52), Expect = 0.80
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +2
Query: 428 SDQNTNIETEVIDTYAEISQNVETVHKADELGNIYTDNSEYLNQTDVLTDVTDHYESYGN 607
SDQ N+ T E+ V + + N+Y ++ N V T+ E+ GN
Sbjct: 237 SDQQENL------TLKEVDNKVYGMALSPVTHNLYYNSPSSENLYYVNTESLMKSENQGN 290
Query: 608 DYQFENSYNQFQS 646
D Q+E + F S
Sbjct: 291 DVQYERVQDVFDS 303
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.4 bits (48), Expect = 2.4
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 605 NDYQFENSYNQFQSDGEKYDRGVGDAESSVVPATTDFHHTE-SSH-IYEFQTA 757
N + ++ Y + DGE + G ++ P T + +++ +SH +Y TA
Sbjct: 227 NTFDYDPRYAKMTIDGESFTLKNGICGMALSPVTNNLYYSPLASHGLYYVNTA 279
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 587 HYESYGNDYQFENSY-NQFQSDGEKYDRGVGDAESSVVP 700
+Y +Y N+Y N+Y N + ++ +K + E VP
Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYIEQIPVP 364
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.3
Identities = 6/24 (25%), Positives = 14/24 (58%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQFQSD 649
+ + S N+Y + N+YN + ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNNN 104
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 81 IISNNNSLSNNYNYNNNYNNY 101
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 314 IISNNNSLSNNYNYNNNYNNY 334
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 578 VTDHYESYGNDYQFENSYNQF 640
+ + S N+Y + N+YN +
Sbjct: 314 IISNNNSLSNNYNYNNNYNNY 334
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.4 bits (43), Expect = 9.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 475 CICIYHLSFNICI 437
C CIY S N+C+
Sbjct: 183 CKCIYVQSINLCM 195
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.4 bits (43), Expect = 9.8
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 565 ICLVQVFRIVCINISKFISFV--NSFNILRNFCICIYHLSFNI 443
ICL+ V I ++I +I+F+ +LRN + HL N+
Sbjct: 402 ICLIVV--IALVSIIMYIAFIILQYAGLLRNRSEYLNHLRANV 442
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,580
Number of Sequences: 438
Number of extensions: 3808
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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