Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C13
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 413 e-115
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 411 e-115
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 409 e-114
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 409 e-114
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 408 e-114
03_01_0034 + 318432-318825,318902-319851 403 e-113
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 388 e-108
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 386 e-107
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 220 1e-57
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 211 5e-55
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 208 6e-54
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 178 4e-45
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 165 5e-41
09_04_0325 + 16689613-16689772,16690043-16690329 32 0.69
03_02_0310 + 7315185-7316820,7318332-7318879 29 6.5
02_02_0462 + 10544939-10545130,10545520-10545609 29 6.5
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 8.5
07_01_1194 - 11325882-11326337,11327152-11327262 28 8.5
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 413 bits (1016), Expect = e-115
Identities = 190/256 (74%), Positives = 211/256 (82%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
GG+YVPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV PSPK
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ PT+GDLNHL+S TMS
Sbjct: 175 VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMS 234
Query: 830 GVTTCLRFPGQXNADL 877
GVT CLRFPGQ N+DL
Sbjct: 235 GVTCCLRFPGQLNSDL 250
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 411 bits (1011), Expect = e-115
Identities = 188/256 (73%), Positives = 211/256 (82%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEAS----- 55
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
GG+YVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV PSPK
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ PT+GDLNHL+S TMS
Sbjct: 175 VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMS 234
Query: 830 GVTTCLRFPGQXNADL 877
GVT CLRFPGQ N+DL
Sbjct: 235 GVTCCLRFPGQLNSDL 250
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 409 bits (1008), Expect = e-114
Identities = 188/256 (73%), Positives = 211/256 (82%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
GG++VPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV PSPK
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ PT+GDLNHL+S TMS
Sbjct: 175 VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMS 234
Query: 830 GVTTCLRFPGQXNADL 877
GVT CLRFPGQ N+DL
Sbjct: 235 GVTCCLRFPGQLNSDL 250
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 409 bits (1007), Expect = e-114
Identities = 185/256 (72%), Positives = 212/256 (82%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASC---- 236
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 237 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 294
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV PSPK
Sbjct: 295 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 354
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+S TMS
Sbjct: 355 VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 414
Query: 830 GVTTCLRFPGQXNADL 877
GVT CLRFPGQ N+DL
Sbjct: 415 GVTCCLRFPGQLNSDL 430
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 408 bits (1005), Expect = e-114
Identities = 185/256 (72%), Positives = 212/256 (82%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASC---- 56
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
+VLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV PSPK
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+S TMS
Sbjct: 175 VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234
Query: 830 GVTTCLRFPGQXNADL 877
GVT CLRFPGQ N+DL
Sbjct: 235 GVTCCLRFPGQLNSDL 250
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 403 bits (993), Expect = e-113
Identities = 185/256 (72%), Positives = 208/256 (81%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASC---- 56
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
G++VPRA+L+DLEPGTMD+VRSG YG +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
AVLDVVRKE ENCDCLQGFQ KIREEYPDR+M T+SV PSPK
Sbjct: 115 AVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+ P++GDLNHL+S TMS
Sbjct: 175 VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMS 234
Query: 830 GVTTCLRFPGQXNADL 877
GVT CLRFPGQ N+DL
Sbjct: 235 GVTCCLRFPGQLNSDL 250
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 388 bits (954), Expect = e-108
Identities = 185/277 (66%), Positives = 211/277 (76%), Gaps = 21/277 (7%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASC---- 56
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQ---------------------GFQXXXXXXXXXXXXXXXXXXX 586
+VLDVVRKE ENCDCLQ GFQ
Sbjct: 115 SVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLIS 174
Query: 587 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYR 766
KIREEYPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+R
Sbjct: 175 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 234
Query: 767 TLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQXNADL 877
TLK+ P++GDLNHL+S TMSGVT CLRFPGQ N+DL
Sbjct: 235 TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 271
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 386 bits (949), Expect = e-107
Identities = 184/272 (67%), Positives = 209/272 (76%), Gaps = 16/272 (5%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+H+Q GQCGNQIGAKFWE+I EHG+DPTG Y GTS QLERI+VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEAS----- 55
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
GG++VPRA+L+DLEPGTMD++RSG G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 470 AVLDVVRKECENCDCLQ----------------GFQXXXXXXXXXXXXXXXXXXXKIREE 601
+VLDVVRKE ENCDCLQ GFQ KIREE
Sbjct: 115 SVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREE 174
Query: 602 YPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVP 781
YPDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNEALYDIC+RTLK+
Sbjct: 175 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 234
Query: 782 NPTYGDLNHLVSLTMSGVTTCLRFPGQXNADL 877
NP++GDLNHL+S TMSGVT CLRFPGQ N+DL
Sbjct: 235 NPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 266
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 220 bits (538), Expect = 1e-57
Identities = 112/257 (43%), Positives = 155/257 (60%), Gaps = 1/257 (0%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MREI+ + GQ G Q+G WE+ EHGI+P G SD + V ++ + +E
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTM--PSDTT---VGVAHDAFNTFFSE 55
Query: 290 SG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 466
+G GK+VPRAI +DLEP +D VR+G+Y QLF P+ + G+ A NN+A+GHYT G E+V
Sbjct: 56 TGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIV 115
Query: 467 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 646
D LD VRK +NC LQGF ++ +Y + +++ PSP
Sbjct: 116 DLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSP 175
Query: 647 KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTM 826
+VS VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +
Sbjct: 176 QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQII 235
Query: 827 SGVTTCLRFPGQXNADL 877
S +TT LRF G N D+
Sbjct: 236 SSLTTSLRFDGAINVDV 252
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 211 bits (516), Expect = 5e-55
Identities = 107/258 (41%), Positives = 149/258 (57%), Gaps = 2/258 (0%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL--ERISVYYNEASVAT 283
MRE + + GQ G Q+G WE+ EHGI P G G + + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGA-- 58
Query: 284 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 463
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 59 ----GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 464 VDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 643
VD LD +RK +NC LQGF ++ +Y + ++V PS
Sbjct: 115 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 174
Query: 644 PKVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 823
P+VS +VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS
Sbjct: 175 PQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQV 234
Query: 824 MSGVTTCLRFPGQXNADL 877
+S +T LRF G N D+
Sbjct: 235 ISSLTASLRFDGALNVDV 252
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 208 bits (507), Expect = 6e-54
Identities = 108/256 (42%), Positives = 147/256 (57%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 289
MRE + + GQ G Q+G WE+ EHGI G + SD + +N T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADG--QMPSDRTVGGGDDAFNTFFSETG- 57
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 -AGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVD 116
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 649
LD +RK +NC LQGF ++ +Y + ++V PSP+
Sbjct: 117 LCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 176
Query: 650 VSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLTMS 829
VS +VVEPYN+VLS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 177 VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVIS 236
Query: 830 GVTTCLRFPGQXNADL 877
+T LRF G N D+
Sbjct: 237 SLTASLRFDGALNVDV 252
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 178 bits (434), Expect = 4e-45
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 3/258 (1%)
Frame = +2
Query: 113 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 292
REI+ +Q GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQAD------ 56
Query: 293 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELV 466
Y+PRA+L+DLEP ++ +++ Y L+ +N + GAGNNWA G Y +G ++V
Sbjct: 57 DQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVV 115
Query: 467 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 646
D ++D++ +E + D L+GF + + Y +++ TYSV P+
Sbjct: 116 DDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQ 175
Query: 647 -KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYRTLKVPNPTYGDLNHLVSLT 823
+ SD VV+PYN++L++ +L N D +DN AL I L + NPT+ N LVS
Sbjct: 176 METSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTV 235
Query: 824 MSGVTTCLRFPGQXNADL 877
MS TT LR+PG N DL
Sbjct: 236 MSASTTTLRYPGYMNNDL 253
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 165 bits (400), Expect = 5e-41
Identities = 87/217 (40%), Positives = 121/217 (55%), Gaps = 21/217 (9%)
Frame = +2
Query: 290 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 469
S GK+VPRA+ +DLEP +D V++G Y QLF P+ + + A NN+A+GHYT G E+VD
Sbjct: 117 SSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVD 176
Query: 470 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP- 646
LD +RK +NC LQGF ++ +Y + +++ PSP
Sbjct: 177 LCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQ 236
Query: 647 --------------------KVSDTVVEPYNAVLSIHQLVENTDETYCIDNEALYDICYR 766
K+S VVEPYN+VLS H L+E+TD +DNEA+YDIC R
Sbjct: 237 YFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKR 296
Query: 767 TLKVPNPTYGDLNHLVSLTMSGVTTCLRFPGQXNADL 877
+L + PTY +LN L+S +S +TT LRF G N D+
Sbjct: 297 SLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDI 333
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 214
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
Frame = +2
Query: 365 AYGQLFR-----PDNFVFGQSGAGN-NWA 433
AY Q+FR PDNFVF QS AG NWA
Sbjct: 119 AYSQIFRLPRFNPDNFVFHQSVAGGINWA 147
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 679 RSSLHPSTSREYRRNLLHRQ*GPLRYLLQDSQGTEPNVRRPEPPGVAD-HVRRDDVPAVP 855
R LH S + R+++ + +LQD + R G+ D H +RD++ ++
Sbjct: 263 RGGLHASRPDKILRDIVSDSVTAMAQVLQDFPSERLELLREAVRGMIDSHEKRDELASLQ 322
Query: 856 RTXERR 873
R ERR
Sbjct: 323 RKLERR 328
>02_02_0462 + 10544939-10545130,10545520-10545609
Length = 93
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 875 GRRSXVRGTAGTSSRRTWSATPG-GSGRRTLGSVP*ESCSRYRKGPHCLC 729
G S RG SRR G G GR TL + + ++ +GPHC C
Sbjct: 18 GGTSGDRGGWEEESRRCEERQLGVGGGRETLKILDGDFYTKLTEGPHCKC 67
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.3 bits (60), Expect = 8.5
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 110 MREIVHLQAGQCGNQIGAKFWEIISEEHGI--DPTG--VYRGTSDLQLERISVYYNEASV 277
MRE V +Q G N +G+ FW E G+ DP V++ + L ++ V Y S
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAA-LDMD---VLYR--SG 54
Query: 278 ATAESGGKYVPRAILLD 328
T + Y PR + +D
Sbjct: 55 ETHQGVATYCPRLVSVD 71
>07_01_1194 - 11325882-11326337,11327152-11327262
Length = 188
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3
Query: 533 SVGNPGGNRSSHTPCGLHQGRRR 465
+VG PGG RSS G HQ RRR
Sbjct: 94 TVGTPGGRRSSRG--GSHQARRR 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,690,730
Number of Sequences: 37544
Number of extensions: 443956
Number of successful extensions: 1536
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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