Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C12
(826 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 40 0.003
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 37 0.022
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 33 0.21
12_01_0393 - 3100230-3100714,3100973-3101097,3101271-3101399,310... 31 0.84
03_02_0187 - 6248226-6249226,6249296-6250148 31 0.84
01_01_1071 - 8446761-8447440,8449334-8450489 31 1.1
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 30 1.9
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 30 1.9
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 3.4
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 29 5.9
08_02_1448 - 27168389-27172021 29 5.9
01_05_0407 - 21883009-21883950 29 5.9
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 7.8
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 28 7.8
03_06_0636 - 35215034-35215336,35215417-35215584,35215599-352157... 28 7.8
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +2
Query: 158 KSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRS 337
K K G + + AKKK K KI++ + KI E + E D S
Sbjct: 437 KGKRGGGANEKDKRAKKKQAKQKKNNRKIKDKERDEKFEAKILERLHDETAIDDSDGLSS 496
Query: 338 KQADEIEVKTEKIEESITKAASDV 409
KQA+E+ K E +EE + D+
Sbjct: 497 KQAEEVTTKVENLEEGASDRQGDL 520
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 36.7 bits (81), Expect = 0.022
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 9/179 (5%)
Frame = +2
Query: 221 NDPATEKIQELLKSMMAPPKISE-AEYREKFATSPDTRRSKQADEI--EVKTEKIEESIT 391
+DPA E L + P+ AE+ ++ + D ++SKQAD++ EV E+I ES
Sbjct: 241 DDPAKEDDTAYLDHKESFPEDKVIAEHADEEVKAED-QQSKQADDMDAEVLQEEIPESKE 299
Query: 392 KAASDVAQAIGGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMKV----DRTVEPDEVQQ 559
+ QA V EA L + S + V ++T E D +
Sbjct: 300 SDLPETEQAEEASVDDQEALNQQPALETNDSLSVKAEETCHQSNVATCGEKTPEDDATTR 359
Query: 560 KP--DTREQQVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQGRDSNRSGTPQITEID 730
+P DT+E+Q + V + K EA T + ++S+ V D Q + + + I I+
Sbjct: 360 EPTVDTKEEQNQGSVEEMKDAEAVDTEETVQQSS-VAFDEAIQDHAATTNPSSDIQSIE 417
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 33.5 bits (73), Expect = 0.21
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Frame = +2
Query: 170 NDGKPQVIQDA--KKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRSKQ 343
N+G+ QV +KK ++ P +++ E + A K +E + A+ + S
Sbjct: 142 NNGQRQVYNGGQYRKKNLQYRPKEKQLSETASACSAENK---SEDKLDSASETGKKESVA 198
Query: 344 ADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMK 523
D + EES A D ++ GGD ++ + + + G + D V K
Sbjct: 199 GDAVAKPVSGPEESTGDVAQDNSKKDGGDPEKKKVR--NTLSGSAKRKLKKKHDSKVSGK 256
Query: 524 VDRTVEPDEV----QQKPDTREQQVKRLVSKAKTTEAS 625
++ E EV ++K T E+ K L K K E S
Sbjct: 257 TEKEAEKAEVLKEEERKDMTLEEYEKVLEEKRKALEDS 294
>12_01_0393 -
3100230-3100714,3100973-3101097,3101271-3101399,
3102480-3102508
Length = 255
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Frame = +2
Query: 140 ARCLSDKSKDNDGKPQV----IQDAKKKTVKNDPATEKIQELLKSMMAPP----KISEAE 295
A CL ++ DG QV + D T DP ++Q+ MAPP S A
Sbjct: 123 AMCLENQEGSKDGTEQVEFHGVPDPNMDTEPQDPEAAEMQDAADRNMAPPIGGSNASRAN 182
Query: 296 YREKFATSPDTR 331
+ AT P R
Sbjct: 183 HPSMAATQPANR 194
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 31.5 bits (68), Expect = 0.84
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
Frame = +2
Query: 464 VLGKINQTSTTLSDLLVGMKVD--RTVEPDE--VQQKPDTREQQVKRLVS---KAKTTEA 622
V ++N+T D+L+G KV T+ P E + Q + + KR+V+ +A + A
Sbjct: 404 VAQELNRTVVYWEDVLLGPKVTVGPTILPRETTILQTWNDGPENTKRVVAAGYRAIVSSA 463
Query: 623 SPTRYSQRKSAYVPNDRTRQGRDSNRSGTPQITEIDIFGGEPLGIFKTTEPNY 781
S +V ND ++ R GTP + GG FKT + Y
Sbjct: 464 SYYYLDCGHGGWVGNDSRYDKQEKEREGTPLFNDPGGTGGSWCAPFKTWQRVY 516
>01_01_1071 - 8446761-8447440,8449334-8450489
Length = 611
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/98 (26%), Positives = 42/98 (42%)
Frame = +2
Query: 266 MAPPKISEAEYREKFATSPDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQTE 445
MA P A E+ T P+TRR ++ + I ++ A + + G T+
Sbjct: 144 MADPDGGVAAAEEEDETEPETRRRRRRG--ARAEDDIHAWLSAAMGNQGTCLDG-FHGTD 200
Query: 446 AELLSRVLGKINQTSTTLSDLLVGMKVDRTVEPDEVQQ 559
+ LL RV + Q + +S+LL K R + P Q
Sbjct: 201 SRLLRRVESAVTQLTQLVSNLLAMHKKLRDITPQHQHQ 238
>11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 344 ADEIEVKTEKIEESITKAASDVA----QAIGGDVKQTEAELLSRVLGKINQTSTTLSDLL 511
++E E K K+E +++ + + GD+K + + LS GK+ + T+++L
Sbjct: 751 SEEYEAKCRKLEAQLSRDSREARLWRLANTNGDLKVKQDKELSSAAGKLVECQKTIANL- 809
Query: 512 VGMKVDRTVEPDEVQQKPDTREQQVKRLVSKAKTTEASPTRYS 640
G ++ + D V +P+ E L + E P ++
Sbjct: 810 -GRQLKSLTDLDSVTAEPEKLESGDALLDFREPDVEVPPAGFA 851
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 30.3 bits (65), Expect = 1.9
Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Frame = +2
Query: 158 KSKDNDGKPQVIQDAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATSPDTRRS 337
+S+D DG P ++KK+T D +++K L K+S + + K + D
Sbjct: 300 ESEDEDGFPVSFSESKKRT---DGSSKKKGNLNN------KMSTEDRKRKSSAVGD--HH 348
Query: 338 KQADEIEVKTEKIEESITKAASDVAQAIGG---DVKQTE--AELLSRVLGKINQTSTTLS 502
+ E++ + + + + K A A+GG ++KQ + A+L+ K +T+ +
Sbjct: 349 DPSGEVKDENDGVSKK-NKKAKAKKTAVGGVEKEIKQEDSPADLVDAKQKKNKNKNTSEA 407
Query: 503 DLLVGMKVDRTVEPDEVQQKPDTREQQVKRLVSKAKTTEASPTRYSQRKSAYVPNDRTRQ 682
+ D+T + + DT ++ K+ +K K T+ +Q N + Q
Sbjct: 408 EAGAHQNTDKT-KHIHTDAEEDTAQEASKKKKNKKKKTQEKNESENQTPKTQEKNAKGNQ 466
Query: 683 GRDSNRSGT 709
+++ +G+
Sbjct: 467 TSNTDLTGS 475
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.5 bits (63), Expect = 3.4
Identities = 36/201 (17%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
Frame = +2
Query: 149 LSDKSKDNDGKPQVIQ---DAKKKTVKNDPATEKIQELLKSMMAPPKISEAEYREKFATS 319
L ++++D + Q+++ D K K++ +++ + +M + EA++
Sbjct: 1287 LQEENEDLTRRNQLMEKELDLKTSQNKDENTNKQVSLQDEVLMLQSSLDEAKFENGKLEG 1346
Query: 320 PDTRRSKQADEIEVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLGK---INQTS 490
S++ +E++ + + + ++ + A G + A+ +LG + +TS
Sbjct: 1347 LLQSLSEECEELKAQKGMLTDKVSCMQDTLNAANEGKQIEISAQTKLVMLGDEPPVKETS 1406
Query: 491 TTL-SDLLVGMKVDRTVEPDEVQQKPDTREQQVKRLVSKAKTTEAS-PTRYSQRKSAYVP 664
L ++L + + R E QQK + +++ + L + + E + SQ K
Sbjct: 1407 DVLEAELKSELSIIRGAN-SEYQQKIHSLQKENEDLTRRNQLMEKELDLKTSQNKD---- 1461
Query: 665 NDRTRQGRDSNRSGTPQITEI 727
+ +QG D+N +G + E+
Sbjct: 1462 ENTNKQGNDANENGDSPVNEV 1482
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 539 EPDEVQQKPDTREQQVKRLVSKAKTTEASPTRYSQ--RKSAYVPNDRTRQGRDSN 697
E D+ +KP RE K+L +A + + +R + RKS+ P+D G+DSN
Sbjct: 307 EADDTTRKPGDRET-TKKLPKQATPRKKTFSRPAPKIRKSSRKPSDIDPSGKDSN 360
>08_02_1448 - 27168389-27172021
Length = 1210
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 440 TEAELLSRVLGKINQTSTTLSDLLVGMKVDRTVEPDEVQ 556
T ++ LS VL K+N+ +++L G+ VDRT P E++
Sbjct: 115 TMSKKLSNVLEKMNKLVDKMNEL--GLSVDRTESPQELK 151
>01_05_0407 - 21883009-21883950
Length = 313
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 257 KSMMAPPKISEAEYREKFATSPDTRRSKQADEIE---VKTEKIEESITKAASDVAQA-IG 424
K + + S+A RE+ A+S RRS DE V + + T AA+ A A
Sbjct: 55 KPLPSSSSSSKAARRERGASSSTRRRSAPGDEGSSGGVGGSSAKAAATAAAAAAATATTA 114
Query: 425 GDVKQTEAELLSRVLGKINQT 487
+V T +++ ++ G++ +T
Sbjct: 115 AEVSPTPSDVAAKANGRVGET 135
>07_03_0635 + 20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 356 EVKTEKIEESITKAASDVAQAIGGDVKQTEAELLSRVLGKINQTSTTLSDLLVGMKVDRT 535
E+K + ES + SD++ A V L+ ++G TTL D+L G K T
Sbjct: 866 EMKAQGFTESRLQLLSDISGAFRPGV-------LTALVGVSGAGKTTLMDVLAGRKTSGT 918
Query: 536 VEPD 547
+E D
Sbjct: 919 IEGD 922
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 28.3 bits (60), Expect = 7.8
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Frame = +2
Query: 158 KSKDNDGKPQV-IQDAKKKTVKNDPATEKI-QELLKSMMAPPKISEAEYREKFATSPDTR 331
K+ ND V +++ KKT NDP E I +E K+ + + E PD
Sbjct: 1225 KTAANDHVEDVTVEEPDKKTAANDPVEEVIPEETDKNTTTNDPVEDVTIEE-----PD-M 1278
Query: 332 RSKQADEIEVKTEKIEESITKAAS--DVAQAIGGDVK-QTEAELLSRVLGKINQTSTTLS 502
+++ D +E T +EE +A + ++A A D K E + + +T TT
Sbjct: 1279 KTEANDPVEEAT--VEEPAVEAGTIEEIATAEARDEKTMITEETAQDPMVEDEKTMTTEE 1336
Query: 503 DLLVGMKVD-RTVEPDEVQQKP 565
+ M D +TV +E Q P
Sbjct: 1337 TVQEPMVEDEKTVTTEETVQDP 1358
>03_06_0636 -
35215034-35215336,35215417-35215584,35215599-35215799,
35215877-35215962,35216037-35216229,35216304-35216489
Length = 378
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 642 CEYLVGEASVVFALLTSLFTCCSLVSGFCWTSSGSTV 532
C LVG+ F L L SL FC+ +G TV
Sbjct: 113 CRRLVGDTISFFGQLNHLVNTVSLGHDFCFEEAGDTV 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,117,489
Number of Sequences: 37544
Number of extensions: 357828
Number of successful extensions: 1191
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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