Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C10
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-5|CAB54428.1| 237|Caenorhabditis elegans Hypothetical ... 31 1.2
AC024859-1|ABA00161.2| 443|Caenorhabditis elegans Hypothetical ... 31 1.2
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 30 2.7
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 30 2.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006627-9|AAK85464.1| 367|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 29 6.2
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 6.2
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 6.2
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 6.2
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 29 6.2
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 29 6.2
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 29 6.2
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 6.2
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 29 6.2
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 6.2
AC006627-7|AAK85463.1| 218|Caenorhabditis elegans Hypothetical ... 29 6.2
U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppress... 28 8.2
U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein. 28 8.2
S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein. 28 8.2
>AL110487-5|CAB54428.1| 237|Caenorhabditis elegans Hypothetical
protein Y39E4B.6 protein.
Length = 237
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 184 QLIKQVADNKRLCQTVGCGKETENKLLLQIREAEQVSDFERILNTNAILCERAKKHV 354
+L+++ D + L + +G KETEN+ L + A +S E + +T AI+ ++K V
Sbjct: 179 ELLERDQDTQVLTRELG-SKETENRHLRSLLSAHGISPDEPVTSTTAIVVGQSKSPV 234
>AC024859-1|ABA00161.2| 443|Caenorhabditis elegans Hypothetical
protein Y71H2AM.9 protein.
Length = 443
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +1
Query: 379 KPSASVLPRPRSSYSLYTVSQAYHYLFRQH------EKSLQPLIDEYRQTTDEQR 525
KP S+ +S++ LYT+++ YH + H E +PL+ ++ TD +R
Sbjct: 92 KPVLSLTHHGKSNHQLYTLTEVYHKALKVHGSTEALEAHRRPLVAMRKELTDAER 146
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/106 (24%), Positives = 48/106 (45%)
Frame = +1
Query: 580 DLSEFYEDDQALRKEVETITDRIIAAEVKASEVKQRSDKRSKNFRVNLAGLIGLHVNGEG 759
D E YE D+ ++E++T D I E + ++ +D+R ++ +++G G
Sbjct: 668 DEEEKYEIDE--KEEIQTKKDETINEEDSEIDEQRMNDRRRYSYE---------NIDGVG 716
Query: 760 CSPNHDESGTSPEVDRDAKNEEEWPAPIMSTNSNEERISQNAINVE 897
+ D G + DRD EEE +++ + SQN + E
Sbjct: 717 DDASSDSRG---KTDRDDSEEEEDDDSRRGGDTSHDEDSQNTVGSE 759
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/106 (24%), Positives = 48/106 (45%)
Frame = +1
Query: 580 DLSEFYEDDQALRKEVETITDRIIAAEVKASEVKQRSDKRSKNFRVNLAGLIGLHVNGEG 759
D E YE D+ ++E++T D I E + ++ +D+R ++ +++G G
Sbjct: 668 DEEEKYEIDE--KEEIQTKKDETINEEDSEIDEQRMNDRRRYSYE---------NIDGVG 716
Query: 760 CSPNHDESGTSPEVDRDAKNEEEWPAPIMSTNSNEERISQNAINVE 897
+ D G + DRD EEE +++ + SQN + E
Sbjct: 717 DDASSDSRG---KTDRDDSEEEEDDDSRRGGDTSHDEDSQNTVGSE 759
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = +1
Query: 595 YEDDQALRKEVETITDRIIAAEVKASEVKQRSDKRSKNFRVNLAGLIGLH 744
YE+ + +E E + DR+ AA++ + V+ + K ++ + ++ H
Sbjct: 682 YEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNH 731
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = +1
Query: 595 YEDDQALRKEVETITDRIIAAEVKASEVKQRSDKRSKNFRVNLAGLIGLH 744
YE+ + +E E + DR+ AA++ + V+ + K ++ + ++ H
Sbjct: 682 YEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNH 731
>AC006627-9|AAK85464.1| 367|Caenorhabditis elegans Hypothetical
protein E01A2.7 protein.
Length = 367
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +1
Query: 277 EAEQVSDFERILNTNAILCERAKKHVWRACGPALKPSASVLPRPRSSYSLYTVSQAYHYL 456
E +++S+ E + + + + H+W C P +K +A L S +LY SQ
Sbjct: 253 EIQKISEIETLTGCDNFYVD-TQDHLWAGCHPVVKDAAGHLGNVSDS-TLYGPSQVLRVS 310
Query: 457 FRQHEKSLQ 483
F + K+ +
Sbjct: 311 FSKDLKTAE 319
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 246 LFSAADSLTQPLVVGDLFYKLSRFRKGTSSK 154
LF+ SL P+V G L Y +K TSS+
Sbjct: 232 LFTVIPSLILPIVTGTLIYFFKTLKKSTSSR 262
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = +1
Query: 565 FDNLQDLSEFYEDDQALRKEVETITDRIIAAEVKASEVKQRSDKRSKNFRVNLAGLIGLH 744
F NL + + EDD + ++ DR++A + QR D S + +G L
Sbjct: 130 FPNLNSIKDEMEDDDSDPALESSVLDRLLA------QTAQRLDSISPEIENDESGTQSLD 183
Query: 745 VNGEGCSPNHDESGTSPEVDRDAKNEEEWPAPIMS 849
N +G + DE D D + EE+ P + S
Sbjct: 184 GNLDGVDGDGDEEEDLKIKDED-EVEEDGPEKVKS 217
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 583 LSEFYEDDQALRKEVETITDRIIAAEVKA-SEVKQRSDKRSKNFRVNLAGL 732
L E E+ +ALRK ++ DR+IAA A + +K + K ++ +A L
Sbjct: 503 LQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQAEIAEL 553
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 583 LSEFYEDDQALRKEVETITDRIIAAEVKA-SEVKQRSDKRSKNFRVNLAGL 732
L E E+ +ALRK ++ DR+IAA A + +K + K ++ +A L
Sbjct: 503 LQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQAEIAEL 553
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 583 LSEFYEDDQALRKEVETITDRIIAAEVKA-SEVKQRSDKRSKNFRVNLAGL 732
L E E+ +ALRK ++ DR+IAA A + +K + K ++ +A L
Sbjct: 519 LQEKEEEMEALRKNLQFEIDRLIAALADAEARMKSEISRLKKKYQAEIAEL 569
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 460 RQHEKSLQPLIDEYRQTTDEQRSACP 537
R+ E + P+++++R+ TD+QRS P
Sbjct: 833 RKAEDAAAPIVEKFRKVTDKQRSTPP 858
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 460 RQHEKSLQPLIDEYRQTTDEQRSACP 537
R+ E + P+++++R+ TD+QRS P
Sbjct: 833 RKAEDAAAPIVEKFRKVTDKQRSTPP 858
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 514 DEQRSACPPSSLLGNNWFDNLQDLSEFYEDDQALRKEVETITDRI 648
DE + +LL ++W S+ + D A+RKE+E TDR+
Sbjct: 76 DESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 514 DEQRSACPPSSLLGNNWFDNLQDLSEFYEDDQALRKEVETITDRI 648
DE + +LL ++W S+ + D A+RKE+E TDR+
Sbjct: 76 DESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 460 RQHEKSLQPLIDEYRQTTDEQRSACP 537
R+ E + P+++++R+ TD+QRS P
Sbjct: 833 RKAEDAAAPIVEKFRKVTDKQRSTPP 858
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 514 DEQRSACPPSSLLGNNWFDNLQDLSEFYEDDQALRKEVETITDRI 648
DE + +LL ++W S+ + D A+RKE+E TDR+
Sbjct: 76 DESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 460 RQHEKSLQPLIDEYRQTTDEQRSACP 537
R+ E + P+++++R+ TD+QRS P
Sbjct: 833 RKAEDAAAPIVEKFRKVTDKQRSTPP 858
>AC006627-7|AAK85463.1| 218|Caenorhabditis elegans Hypothetical
protein E01A2.6 protein.
Length = 218
Score = 28.7 bits (61), Expect = 6.2
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Frame = +1
Query: 463 QHEKSLQPLIDEYRQTTDEQRSACPPSSLLGNNWFDNLQDLSEF---YEDDQALRKEVET 633
QHE + Y R+ CPP L S F +++ + + T
Sbjct: 12 QHEYESFLTDETYNGEAKRARTQCPPFRAQMGTIAATLPSTSTFAQKFKEQEESVFQAAT 71
Query: 634 ITDRIIAAEVK---ASEVKQRSDKRSKNFRVNLAGLIGLHVNGEGCSPNHDESGTSPEVD 804
+ R+ ++K +SEVK KR R N G G+GCS N+ ++ +P
Sbjct: 72 LMTRLSRNQLKTYLSSEVKNLR-KRKAIPRSNDFDDDG-DQRGDGCSSNYSKAYRAPSSP 129
Query: 805 RDAKNEE-EWPAPIMSTNSNEER 870
+ + E E P+ ++ S+ +R
Sbjct: 130 KSGSDSEGEAPSTSVTDRSSAKR 152
>U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppressor
of activatedras protein 1 protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 670 SEVKQRSDKRSKNFRVNLAGLIGLHVNGEGCS-PNHDESGTSPEVDRDAKNEEE 828
+E++Q ++ +K+ +++G ++ EG NH++S S EVD +A +E
Sbjct: 381 TEIQQETENHNKSAAASMSG----NIESEGTIVANHEDSTGSQEVDSEAAPSQE 430
>U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 670 SEVKQRSDKRSKNFRVNLAGLIGLHVNGEGCS-PNHDESGTSPEVDRDAKNEEE 828
+E++Q ++ +K+ +++G ++ EG NH++S S EVD +A +E
Sbjct: 381 TEIQQETENHNKSAAASMSG----NIESEGTIVANHEDSTGSQEVDSEAAPSQE 430
>S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 670 SEVKQRSDKRSKNFRVNLAGLIGLHVNGEGCS-PNHDESGTSPEVDRDAKNEEE 828
+E++Q ++ +K+ +++G ++ EG NH++S S EVD +A +E
Sbjct: 381 TEIQQETENHNKSAAASMSG----NIESEGTIVANHEDSTGSQEVDSEAAPSQE 430
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,672,996
Number of Sequences: 27780
Number of extensions: 375185
Number of successful extensions: 1468
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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