Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_C08
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 329 DDVNYRCYWCSVAYYHYCV 385
           D + ++CY     YY YCV
Sbjct: 44  DSLVFKCYNLRRIYYFYCV 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 505  WGSETTKRDWTKETCNRRT 561
            W S TT   W   T  RRT
Sbjct: 1042 WWSSTTTSPWWTTTTTRRT 1060



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 505  WGSETTKRDWTKETCNRRT 561
            W S TT   WT  T  R T
Sbjct: 1043 WSSTTTSPWWTTTTTRRTT 1061


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 389 CPHNNDNKQHCTNSTYN 339
           C + ++ K H + +TYN
Sbjct: 336 CKNEDETKNHYSKNTYN 352


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 389 CPHNNDNKQHCTNSTYN 339
           C + ++ K H + +TYN
Sbjct: 228 CKNEDETKNHYSKNTYN 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,159
Number of Sequences: 336
Number of extensions: 2913
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)