Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_C07
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.76 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   4.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   4.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   4.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.4  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +1

Query: 25  NSSKKNCVHISNIK 66
           NSS++NCV +SN+K
Sbjct: 66  NSSEENCVSMSNLK 79


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 462 QFLNEFTRLVHLQHYVTTTNKFTIDKDLRY 373
           + +    RL+H +  +T    FTID  L +
Sbjct: 278 EVIGNILRLMHRRFEITALRLFTIDNKLLF 307


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -3

Query: 348 YTLSKIFITQHIMALVRNCMHPHNLNNSITE 256
           Y+ +K+F+ +HI+      +     NN+  E
Sbjct: 156 YSWAKVFLVEHILVQTNKLVLALECNNTTAE 186


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -3

Query: 348 YTLSKIFITQHIMALVRNCMHPHNLNNSITE 256
           Y+ +K+F+ +HI+      +     NN+  E
Sbjct: 156 YSWAKVFLVEHILVQTNKLVLALECNNTTAE 186


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 540 SQVLCI*FCSFLFVLE 587
           SQV+ I FC+F+ VL+
Sbjct: 177 SQVMLIQFCAFVVVLK 192


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 712 KKLSHFNKFLLHQRFLHKYFNFNNYVFVSI 623
           ++ SH+  F+    F   Y ++ +Y+F +I
Sbjct: 110 REKSHYCLFVASNCFFWSYQSYMSYIFANI 139


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 712 KKLSHFNKFLLHQRFLHKYFNFNNYVFVSI 623
           ++ SH+  F+    F   Y ++ +Y+F +I
Sbjct: 110 REKSHYCLFVASNCFFWSYQSYMSYIFANI 139


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 540 SQVLCI*FCSFLFVLE 587
           SQV+ I FC+F+ VL+
Sbjct: 2   SQVMLIQFCAFVVVLK 17


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 561 FCSFLFVLEIIVLIHFKWWYCIET 632
           F +FLFVL    +   +++YC ++
Sbjct: 234 FQNFLFVLSTFSICITQFYYCYDS 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,971
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)