Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C05
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 34 0.088
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 32 0.35
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 32 0.35
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 32 0.35
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 32 0.35
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 32 0.35
Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF106583-12|AAD03133.1| 432|Caenorhabditis elegans Hypothetical... 27 7.6
AF024492-1|AAF98622.2| 314|Caenorhabditis elegans Hypothetical ... 27 7.6
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 33.9 bits (74), Expect = 0.088
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 324 VTPSGPMYANSP-RTSRASFSVPMFFS*PVS*ALIPLEVS*PVLYPSTPMLSLSCLMTTA 148
VT G + N P + A F +P + +S + S P + PSTP +S + L TT
Sbjct: 710 VTTPGSLVTNDPVMDTEAPFDLPTAETFTLSNFWLTTPSSAPSIVPSTPTISPAPLPTTG 769
Query: 147 SASGP 133
S+ GP
Sbjct: 770 SSGGP 774
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 128 QXGPD-ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--G 292
Q P+ A V + +D+D++G +G GY T +A L + + E+R G
Sbjct: 100 QQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSG 159
Query: 293 EFAYIGPDGVTYAVTYVANEGG 358
E ++ PD T A+EGG
Sbjct: 160 ELEWVRPDSKTQVTIEYASEGG 181
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 128 QXGPD-ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--G 292
Q P+ A V + +D+D++G +G GY T +A L + + E+R G
Sbjct: 49 QQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSG 108
Query: 293 EFAYIGPDGVTYAVTYVANEGG 358
E ++ PD T A+EGG
Sbjct: 109 ELEWVRPDSKTQVTIEYASEGG 130
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 128 QXGPD-ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--G 292
Q P+ A V + +D+D++G +G GY T +A L + + E+R G
Sbjct: 100 QQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSG 159
Query: 293 EFAYIGPDGVTYAVTYVANEGG 358
E ++ PD T A+EGG
Sbjct: 160 ELEWVRPDSKTQVTIEYASEGG 181
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 128 QXGPD-ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--G 292
Q P+ A V + +D+D++G +G GY T +A L + + E+R G
Sbjct: 59 QQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSG 118
Query: 293 EFAYIGPDGVTYAVTYVANEGG 358
E ++ PD T A+EGG
Sbjct: 119 ELEWVRPDSKTQVTIEYASEGG 140
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 128 QXGPD-ADAVVIRQDNDNIGV--EGYNTGYETSNGIKAQETGQLKNIGTENEALEVR--G 292
Q P+ A V + +D+D++G +G GY T +A L + + E+R G
Sbjct: 41 QQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSG 100
Query: 293 EFAYIGPDGVTYAVTYVANEGG 358
E ++ PD T A+EGG
Sbjct: 101 ELEWVRPDSKTQVTIEYASEGG 122
>Z81515-5|CAB04193.2| 238|Caenorhabditis elegans Hypothetical
protein F26H11.5 protein.
Length = 238
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 197 NTGYETSNGIKAQETGQLKNIGTENEALE 283
NTG GI A+E+G+ + TE++ L+
Sbjct: 58 NTGLRRMPGISAEESGETQTFETEDDILD 86
>AF106583-12|AAD03133.1| 432|Caenorhabditis elegans Hypothetical
protein F23C8.11 protein.
Length = 432
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 216 EVS*PVLYPSTPMLSLSCLMTTASASGPXWGSDSYGDEESDNEE 85
+++ P YP + ++SC G + D D+E ++EE
Sbjct: 9 QINVPESYPQSVPRNISCQSKETGNRGKSYNEDKSSDDEEEDEE 52
>AF024492-1|AAF98622.2| 314|Caenorhabditis elegans Hypothetical
protein F14F9.5 protein.
Length = 314
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 194 YNTGYETSNGIKAQETGQLKNIG--TENEALEVRGEFAYIGPDGVTYAVTY 340
Y+T Y TSNGI+ T + N G EN ++ + PD V Y
Sbjct: 17 YSTSYSTSNGIRLM-TFNIWNSGANVENGQQKIAKHILMVNPDVVALQEVY 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,686,971
Number of Sequences: 27780
Number of extensions: 171533
Number of successful extensions: 475
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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