Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_C03
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 273 1e-73
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 132 2e-31
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 127 1e-29
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 92 4e-19
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.3
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.4
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 29 4.4
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 29 4.4
Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 273 bits (669), Expect = 1e-73
Identities = 136/250 (54%), Positives = 169/250 (67%)
Frame = +2
Query: 134 KGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISSSQ 313
K +FIVGAKRT FGTFGG + SAT+L +A+ ALK A V VD ++ G V++SS+
Sbjct: 4 KCVFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNVVASSR 63
Query: 314 TDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVENMS 493
DGIY RH LK+G+PQ L +NRLCGSGFQ++VN+AQ I G + I +AGG ENMS
Sbjct: 64 -DGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENMS 122
Query: 494 QAPFAVRNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDEVDNYA 673
PFAVR++RFGTALG Y FED LW LSD Y L MG TAEKLGAQ+ +TR E D +A
Sbjct: 123 MVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEFA 182
Query: 674 LQSQQKWKTANDAGVFKAXIEPVSLTIXRKEVKVXVXXHPRPXTTLXGLXKLPPVFKKEG 853
L+SQ WK A +AGV+K I +++ + E + HPR TT L KL PVF+K+G
Sbjct: 183 LRSQTLWKKAQEAGVYKNEIVGITIKGRKGEESFEIDEHPR-ATTAESLAKLKPVFQKDG 241
Query: 854 LXTAGTASGI 883
L AG ASGI
Sbjct: 242 LVNAGNASGI 251
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 132 bits (320), Expect = 2e-31
Identities = 84/250 (33%), Positives = 126/250 (50%)
Frame = +2
Query: 128 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISS 307
S K FIVGA RTP G+F + +A EL ++A AL+ V P+ + + +GQV +
Sbjct: 20 SNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQVCQA 79
Query: 308 SQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVEN 487
+ G R AAL AG+ V +N++C SG ++I+ +AQ I TG ++ GG+E+
Sbjct: 80 NA--GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGMES 137
Query: 488 MSQAPFAVRNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDEVDN 667
MSQ PF V+ R G + + GL+D+Y + MG EK + GITR + D
Sbjct: 138 MSQVPFYVQ--RGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 668 YALQSQQKWKTANDAGVFKAXIEPVSLTIXRKEVKVXVXXHPRPXTTLXGLXKLPPVFKK 847
YA+ S +K A + G + PV++ +K V + L VF+K
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVK-SKKGVTIVDKDEEFTKVNFDKFTSLRTVFQK 254
Query: 848 EGLXTAGTAS 877
+G TA AS
Sbjct: 255 DGTITAANAS 264
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 127 bits (306), Expect = 1e-29
Identities = 83/252 (32%), Positives = 126/252 (50%), Gaps = 2/252 (0%)
Frame = +2
Query: 128 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQVISS 307
S K +FI+ RTP G + G F N A EL T+A A++ +GV+P +++ ++ G V+ +
Sbjct: 2 SDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLPA 61
Query: 308 SQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGVEN 487
G R +L AG+P + +N++C S +++V +A +I G + G EN
Sbjct: 62 GL--GQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTEN 119
Query: 488 MSQAPFAV--RNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITRDEV 661
MSQ PF V + FG T+ +D GL D PMG+ AEK +GITR+E
Sbjct: 120 MSQVPFYVPRGEIPFGGIQMTDGISKD----GLEDIKEKGPMGLCAEKTVKDYGITREEQ 175
Query: 662 DNYALQSQQKWKTANDAGVFKAXIEPVSLTIXRKEVKVXVXXHPRPXTTLXGLXKLPPVF 841
D YA++S +K A + F + PVS+ R EV V + L PVF
Sbjct: 176 DAYAIESYKKASNAWSSEKFSEEVVPVSVKTSRSEV-VITEDEEYKKLIESKVSSLKPVF 234
Query: 842 KKEGLXTAGTAS 877
++G T A+
Sbjct: 235 VRDGTGTITPAN 246
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 92.3 bits (219), Expect = 4e-19
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Frame = +2
Query: 128 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVD--SMVVGQVI 301
S K FIVGA RTP G+F + +A EL ++A AL+ V P+ + ++ +GQV
Sbjct: 98 SNKDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVC 157
Query: 302 SSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAGGV 481
++ G + R AAL AG+ V +N+ SG ++I+ +AQ I TG +++ GG+
Sbjct: 158 HANA--GQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGM 215
Query: 482 ENMSQAPFAVRNVRFGTALGTNYAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFG 643
E+MSQ PF + V + Y E T+ G+SD + + + E+ G
Sbjct: 216 ESMSQVPFFLARVEQSS---NKYQVEQTVQDGISDFFDKQELCINGERTNGNIG 266
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 85.4 bits (202), Expect = 5e-17
Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)
Frame = +2
Query: 116 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGQ 295
+ ++ I +V A RTPF G VF++ A +LQ A +++ + Q+D ++ G
Sbjct: 18 VAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGT 77
Query: 296 VISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAAKISVAG 475
VI +T I R AAL AG+P + P + C S ++ + TG A +AG
Sbjct: 78 VIQECKTSNI--AREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAG 135
Query: 476 GVENMSQAPFAV-RNVRFGTALGTNYAFE--DTLWAG--------------LSDSYCGLP 604
GVE +S P RN R LG N A + L G +++ G
Sbjct: 136 GVELLSDVPIRYNRNAR-KAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGET 194
Query: 605 MGMTAEKLGAQFGITRDEVDNYALQSQQKWKTANDAGVFKAXIEPVSLTIXRKEVKVXVX 784
MG + ++L A F ++R E D +A++S A G F + PV L K+ K
Sbjct: 195 MGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKF-TDVVPVFL--DGKKPKTIKE 251
Query: 785 XHPRPXTTLXGLXKLPPVF-KKEGLXTAGTAS 877
+ +TL L L P F K G TA AS
Sbjct: 252 DNGIRVSTLEKLSSLKPAFVKPHGTVTAANAS 283
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 457 QDLSSGGSREHVASALRGQKREVRHGSGHQLRLRRHPLGRT 579
QD S++ SA G++ E GSGH +R HP T
Sbjct: 622 QDCHEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPT 662
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 483 RTCRKRPSRSET*GSARLWAPTTPSKTPSGPDSRTHT 593
+T + S+S T G P TPSKTPS +R+ +
Sbjct: 55 KTPSRSASKSATRGRTASKTPKTPSKTPSSASARSRS 91
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +2
Query: 218 QTIATVGALKEAGVSPAQVDSMVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRL 397
Q IAT+ +K AG+ P+ + V G +S D + +AGI V+
Sbjct: 465 QPIATI--VKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQ 522
Query: 398 CGSGFQSIVNSAQDILTGAAKISVAGG 478
SG S++ + + ++T K GG
Sbjct: 523 DASGVASLLATTECVVTEIPKEEAVGG 549
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +2
Query: 218 QTIATVGALKEAGVSPAQVDSMVVGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRL 397
Q IAT+ +K AG+ P+ + V G +S D + +AGI V+
Sbjct: 465 QPIATI--VKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQ 522
Query: 398 CGSGFQSIVNSAQDILTGAAKISVAGG 478
SG S++ + + ++T K GG
Sbjct: 523 DASGVASLLATTECVVTEIPKEEAVGG 549
>Z81575-1|CAB04628.1| 277|Caenorhabditis elegans Hypothetical
protein R08H2.1 protein.
Length = 277
Score = 28.7 bits (61), Expect = 5.8
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Frame = +2
Query: 218 QTIATVGALKEAGVSPAQVDSMVVGQV-ISSSQTDGIYTPRHAALKAGIPQEKPVLGINR 394
++I G+ G S A + + QV I+ D + R LKAG+P EK +
Sbjct: 7 KSIIITGSSSGIGRSAAVIFAKEGAQVTITGRSADRLEETRLQILKAGVPAEKINAVVAD 66
Query: 395 LC-GSGFQSIVNSAQ------DILTGAAKISVAGGVENMSQA 499
+C SG ++ + DIL A + G N QA
Sbjct: 67 VCEASGQDEVIRTTLAKFGKIDILVNNAGALLTDGTSNTDQA 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,524,068
Number of Sequences: 27780
Number of extensions: 377053
Number of successful extensions: 1141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -