Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_B24
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.61 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -2

Query: 266 WLFSSPTYGDIPFSSSSYIAAVVALSFHTPLSIV*YTADPSNADFTPNFNI 114
           W +++  Y D  F++S + AA  +L  H P     YT   +     PNF +
Sbjct: 135 WPYAA-VYTDPAFAASIFHAAATSLPLHYPPPPPVYTHHYARYHPYPNFGV 184


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 106 KCEYQVLISFLANYVIQIFE 47
           K  Y +L SFL N+   IF+
Sbjct: 284 KLSYIILTSFLNNFYFIIFQ 303


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 84  INT*YSHLLHDVKVWREICVTWIRSVLHN 170
           +N  Y +++ +   +RE    W  S+ HN
Sbjct: 106 LNGIYEYIMRNFPYYRENKQGWQNSIRHN 134


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 257 SSPTYGDIPFSSS 219
           +SPT GD+P  SS
Sbjct: 53  ASPTPGDVPTPSS 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,814
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)