Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B24
(576 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009557-1|AAH09557.1| 118|Homo sapiens hypothetical protein P1... 37 0.059
AB167391-1|BAE80091.1| 118|Homo sapiens hypothetical protein P1... 37 0.059
BC042386-1|AAH42386.1| 118|Homo sapiens hypothetical protein P1... 36 0.10
BC047440-1|AAH47440.1| 200|Homo sapiens COMM domain containing ... 33 0.72
AY542162-1|AAS22244.1| 200|Homo sapiens COMMD7 protein. 33 0.72
CR383702-1|CAI95302.2| 200|Homo sapiens COMM domain containing ... 31 2.2
BX640505-1|CAM28357.1| 200|Homo sapiens COMM domain containing ... 31 2.2
BC000628-1|AAH00628.3| 200|Homo sapiens COMM domain containing ... 31 2.2
AL035071-1|CAI19095.2| 200|Homo sapiens COMM domain containing ... 31 2.2
AK027893-1|BAB55436.1| 200|Homo sapiens protein ( Homo sapiens ... 31 2.2
>BC009557-1|AAH09557.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.059
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +1
Query: 109 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 276
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 277 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 426
++P LP+ +I + + WN G+ L P+ + + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>AB167391-1|BAE80091.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.059
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +1
Query: 109 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 276
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGGAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 277 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 426
++P LP+ +I + + WN G+ L P+ + + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>BC042386-1|AAH42386.1| 118|Homo sapiens hypothetical protein P117
protein.
Length = 118
Score = 35.9 bits (79), Expect = 0.10
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +1
Query: 109 FTMLKFGVKSALLGSAVYYTIDKGVWKDSATTAAIYDELEKGMSPYVGELKS----QVPY 276
+++++F +K ++ G AVY D+ + S + A + + + P + + Q
Sbjct: 6 WSLMRFLIKGSVAGVAVYLVYDQELLGPSDKSQAALQKAGEVVPPAMYQFSQYVCQQTGL 65
Query: 277 ELPALPSNDRISYLFKYYWNCGVKATFRFLVELPTHTSNAAFKTYDFISS 426
++P LP+ +I + + WN G+ L P+ + + ++++ +
Sbjct: 66 QIPQLPAPPKIYFPIRDSWNAGIMTVMSALSVAPSKAREYSKEGWEYVKA 115
>BC047440-1|AAH47440.1| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 33.1 bits (72), Expect = 0.72
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN TKN+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190
>AY542162-1|AAS22244.1| 200|Homo sapiens COMMD7 protein.
Length = 200
Score = 33.1 bits (72), Expect = 0.72
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN TKN+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTKNVYIELTLPQFYSFLHEME 190
>CR383702-1|CAI95302.2| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN T+N+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>BX640505-1|CAM28357.1| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN T+N+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>BC000628-1|AAH00628.3| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN T+N+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>AL035071-1|CAI19095.2| 200|Homo sapiens COMM domain containing 7
protein.
Length = 200
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN T+N+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
>AK027893-1|BAB55436.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ14987 fis, clone Y79AA1001077. ).
Length = 200
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = -2
Query: 443 SGVSKDDEIKSYVLKAALLVWVGNSTKNLNVALT-PQFQ*YLNKYD 309
SG S+ +++ S L+ L+V GN T+N+ + LT PQF +L++ +
Sbjct: 145 SGSSELEKVGSIFLQLKLVVKKGNQTENVYIELTLPQFYSFLHEME 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,138,215
Number of Sequences: 237096
Number of extensions: 1539264
Number of successful extensions: 5537
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5537
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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