Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_B22
         (549 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38; Eukaryo...    93   3e-18
UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; ...    93   4e-18
UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2; Caenor...    50   3e-05
UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved ...    44   0.003
UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6; ...    39   0.088
UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;...    33   5.8  
UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.6  

>UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38;
           Eukaryota|Rep: UPF0197 protein C11orf10 - Homo sapiens
           (Human)
          Length = 79

 Score = 93.5 bits (222), Expect = 3e-18
 Identities = 43/79 (54%), Positives = 52/79 (65%)
 Frame = +2

Query: 77  LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 256
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 257 AXXXXXXXXXXXXWVGIYV 313
           +            WVGIYV
Sbjct: 61  SLFMGFGVLFLLLWVGIYV 79


>UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; Bos
           taurus|Rep: UPF0197 protein C11orf10 homolog - Bos
           taurus (Bovine)
          Length = 79

 Score = 93.1 bits (221), Expect = 4e-18
 Identities = 42/79 (53%), Positives = 52/79 (65%)
 Frame = +2

Query: 77  LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 256
           +E+E+M RYTSP+NPAVFPH             AWFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1   MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60

Query: 257 AXXXXXXXXXXXXWVGIYV 313
           +            WVGIY+
Sbjct: 61  SLFMGFGVLFLLLWVGIYI 79


>UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2;
           Caenorhabditis|Rep: UPF0197 protein Y57E12AM.1 -
           Caenorhabditis elegans
          Length = 79

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 26/79 (32%), Positives = 39/79 (49%)
 Frame = +2

Query: 77  LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVA 256
           ++I  M RYT+P+N A  P              A F + +VTSTK +R++ KEL ++  +
Sbjct: 1   MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60

Query: 257 AXXXXXXXXXXXXWVGIYV 313
           +            WVGIYV
Sbjct: 61  SVFLGFGSVFLLLWVGIYV 79


>UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 148

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = +2

Query: 74  SLEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXAWFFV 190
           S  IESM RY SP+NPAV+PH             AWF V
Sbjct: 22  SAAIESMTRYVSPVNPAVYPHLTLILLTIGIFFMAWFLV 60


>UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6;
           Magnoliophyta|Rep: Putative uncharacterized protein -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 76

 Score = 38.7 bits (86), Expect = 0.088
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +2

Query: 107 SPINPAVFPHXXXXXXXXXXXXXAWFFVYEVTSTKASRDMFKELLLSLVAAXXXXXXXXX 286
           SPI  A++P              A FF+YE TS++ +R + KEL  S VA+         
Sbjct: 8   SPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVFLGFGSLF 67

Query: 287 XXXWVGIYV 313
                G+YV
Sbjct: 68  LLLASGVYV 76


>UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;
           Apis mellifera|Rep: PREDICTED: similar to NAT9 - Apis
           mellifera
          Length = 267

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 121 GSFSTSNLFVARNRN-ILHGLVLRLRSYKY*SLKRYVQRVTFIIGSRLIFWFRYFVLVAM 297
           GSF T   F  +  N +     ++L SY +  LKRY     FI G  L  W+++  +   
Sbjct: 172 GSFYTGAEFTQQTYNRMFKNNTMQLESYNWAQLKRYAIYGCFIAGPLLHGWYKWLDMFYK 231

Query: 298 GRDLCVI 318
           G+ +  I
Sbjct: 232 GKTMKTI 238


>UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 489

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 354 YIIHNLNYTLH*YHT*IPTHSNKNKIPKPENKAATNDKSNSLNISLE 214
           ++ H+    +H  +  +P H  +N+IPKP N    N   + LN+  +
Sbjct: 51  HVYHSYPILMHQIYDGLPEHEQQNQIPKPNNPEFKNIFLHKLNLGCQ 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,077,394
Number of Sequences: 1657284
Number of extensions: 7366907
Number of successful extensions: 15865
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15862
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)