Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B20
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 32 0.11
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 31 0.19
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 31 0.19
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 31 0.25
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 31 0.25
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 29 0.58
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 28 1.3
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 28 1.8
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 27 2.4
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 4.1
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 5.4
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 26 5.4
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.2
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 26 7.2
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 26 7.2
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 25 9.5
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 163 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKS 285
+V +IGGG G+G+A ++ G NV L++ ++ A + KS
Sbjct: 69 DVLIIGGGATGTGVAVDASTRGLNVCLLEKTDFASETSSKS 109
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 31.1 bits (67), Expect = 0.19
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +1
Query: 73 PNI*IDSKMMQFKVIVRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDV 252
P + ID K K++ + + + ++ K +TV+GGG++G + V ++ G VT+V+
Sbjct: 195 PGVTIDEK----KIV--SSTGALSLSEVPKKMTVLGGGIIGLEMGSVWSRLGAEVTVVEF 248
Query: 253 SNDALAKAKKSFGTNLSRVAKK 318
LSR+ K
Sbjct: 249 LPAVGGPMDADISKALSRIISK 270
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 31.1 bits (67), Expect = 0.19
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +1
Query: 127 FSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNLSR 306
F S NV V+G G + + Q + AG NVT+ S++ L AKK T+
Sbjct: 156 FGSKEHQVKPGNNVLVLGTGGVSTFALQFALAAGANVTVTSSSDEKLEFAKKLGATHTIN 215
Query: 307 VAKKMYKDNPQ 339
YK PQ
Sbjct: 216 -----YKKTPQ 221
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 30.7 bits (66), Expect = 0.25
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 115 IVRNFSSSSAM--QSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSF 288
I+RNF SSA+ QS++ NV V GG + ++ A L +V D K K +
Sbjct: 581 IIRNFQFSSALKRQSSVSNVRVSGGSFK-TFVSVKGAPEVIATMLREVPKD-YEKIYKDY 638
Query: 289 GTNLSRVAKKMYK 327
G SRV YK
Sbjct: 639 GRKGSRVLALGYK 651
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 30.7 bits (66), Expect = 0.25
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 160 KNVTVIGGGL-MGSGIAQVSAQAGQNVTLVDVSNDALAKAKK 282
KN V G +G IA AQAG NV + ++ D KAKK
Sbjct: 22 KNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKK 63
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 29.5 bits (63), Expect = 0.58
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 160 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAK 273
KNV VIGGG G A +++ G TL+ S D + +
Sbjct: 17 KNVVVIGGGHAGVEAAAAASRLGAKTTLLTKSFDNIGQ 54
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 541 EIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKT 699
E++ V +F GLHF V R L G + Y+T + K VG+T
Sbjct: 250 EVSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRT---YPKIVGET 299
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 27.9 bits (59), Expect = 1.8
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +1
Query: 172 VIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALA--KAKKSFGTNLSRVAKKMYKDNPQEG 345
VIGGGL G G NV L+D N A K + G N + + +
Sbjct: 43 VIGGGLAGLSATNTILDLGGNVLLLD-KNTAFGGNSVKAASGINAAPTQLQFDQHVSDSV 101
Query: 346 EKFVNDSL 369
F NDS+
Sbjct: 102 NTFYNDSI 109
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 129 FKFLCNAKCYQECNSYWRWSNGL 197
F F+CNA Y N Y W+ L
Sbjct: 619 FYFVCNATSYSSLNPYGNWARPL 641
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 273 SQEELWHKPQQGRKEDVQR*SPRRREICE 359
+QE++W K +Q KE+++R RREI E
Sbjct: 19 NQEKVW-KDEQAHKEEMKRVEQLRREIEE 46
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 522 CV*CENSV-TWSYAIKLLKQFMLHSNIFNN 436
CV CE +W + +K + Q ++H+N N
Sbjct: 406 CVLCERKFQSWGHVVKHITQSIMHNNNLKN 435
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 117 RKKFFKFLCNAKCY 158
RK+FF FL N +CY
Sbjct: 629 RKRFFDFLVNTQCY 642
>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 752 GTNSLFTTKPGVSLQVIQVLPTDFPHSIIVLYVASDVSLPL 630
GT+ +FT K V +LP + P I + + +VSLPL
Sbjct: 75 GTSQIFTFKKNVL-----ILPANVPEGIELRILEENVSLPL 110
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 253 SNDALAK---AKKSFGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSAD 420
S DA+ K A K+ NL +V+ D P+ F ND + + +T A +K AD
Sbjct: 254 STDAVPKKLDASKASSLNLEKVS--YLTDEPKFRFDFNNDEMAVVKLSTGIAAFAKDAD 310
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 298 LSRVAKKMYKDNPQEGEKFV--NDSLGRINTATDAA--EASKSAD 420
+S++A+ NP + E+FV D+LG D+ EAS AD
Sbjct: 102 ISKIAEAAQASNPDDEEEFVMEEDNLGEAPLLVDSESYEASVKAD 146
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 437 IASTTRSADLEASAASVAVLILPSESF--TNFSPSWGLSLYIFF 312
+ TT + D + SV + P + + T+ PS+GL LY+FF
Sbjct: 308 VTPTTYANDKSETLRSVMIR-QPMDLYIITDHGPSYGLYLYLFF 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,238,077
Number of Sequences: 5004
Number of extensions: 67251
Number of successful extensions: 191
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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