Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B20
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 161 8e-40
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 129 2e-30
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 126 2e-29
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 113 2e-25
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 109 2e-24
02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154... 33 0.35
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 31 0.80
10_08_0050 + 14469879-14470072,14470620-14471094 31 1.4
04_03_0513 - 16681227-16683936,16685572-16685966 30 1.9
05_07_0219 - 28474661-28475146,28475979-28476644 29 3.2
03_03_0019 + 13786412-13786578,13786692-13786744,13787299-137874... 29 3.2
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 29 3.2
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 29 4.3
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 29 4.3
04_04_0920 + 29429114-29430934 29 4.3
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 29 4.3
02_01_0675 - 5028910-5030379 29 4.3
12_02_0090 + 13493311-13494180 28 7.5
08_02_0277 - 15226062-15226169,15227075-15227203,15227416-152275... 28 7.5
08_01_0945 + 9376997-9377818,9378065-9378373,9379510-9379800,938... 28 7.5
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 28 7.5
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421... 28 7.5
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 28 7.5
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 161 bits (390), Expect = 8e-40
Identities = 88/212 (41%), Positives = 129/212 (60%)
Frame = +1
Query: 133 SSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNLSRVA 312
++ A I V VIG G MGSGIAQ++A AG V L+D AL++A S ++L R+
Sbjct: 2 ATQATAREIAVVGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLV 61
Query: 313 KKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVA 492
K Q + S+ +I + E + ADLV+EAIVE+ +K KLF +LD +
Sbjct: 62 AK-----GQLSQASCEHSIEQIKCVSSVQEL-RDADLVIEAIVESEDIKKKLFVELDKIT 115
Query: 493 PSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMM 672
I ASNTSS+SI +AS R + G+HFFNP P+M+L+E+++G++TSE + +
Sbjct: 116 KPSAILASNTSSISITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVK 175
Query: 673 EWGKSVGKTCITCKDTPGFVVNRLLVPYICEA 768
+ + +GKT I +D PGF+VNR+L+P I EA
Sbjct: 176 SFSERLGKTVICSQDYPGFIVNRILMPMINEA 207
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 129 bits (312), Expect = 2e-30
Identities = 76/217 (35%), Positives = 112/217 (51%), Gaps = 2/217 (0%)
Frame = +1
Query: 145 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNL-SRVAK-K 318
M + V ++GGGLMGSGIA + V L +V+ L NL SRV K K
Sbjct: 310 MPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGK 369
Query: 319 MYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPS 498
M ++ ++ V L E K DLV+EA++EN+ +K ++F L+ PS
Sbjct: 370 MTEERYEKAMSLVTGVLDY--------ERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPS 421
Query: 499 HTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEW 678
H + A+NTS++ +N I + KD+ G HFF+P VM LLE+V+ TS +++
Sbjct: 422 HCVLATNTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDV 481
Query: 679 GKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERG 789
GK + KT I + GF VNR+ PY A+ + G
Sbjct: 482 GKKIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDLG 518
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 126 bits (304), Expect = 2e-29
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 2/202 (0%)
Frame = +1
Query: 157 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNLSRVAKK--MYKD 330
I+ V VIGGGLMGSGIA + +V L +V+ L + +K NL + K+ + KD
Sbjct: 309 IRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKD 368
Query: 331 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIF 510
+N ++ + A D ++ K D+V+EA++E I +K +F L+ V P H I
Sbjct: 369 K-------MNKAMSLLKGALDYSDF-KDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCIL 420
Query: 511 ASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSV 690
A+NTS++ +N + +D+ G HFF+P +M LLE+V+ +TS ++ GK +
Sbjct: 421 ATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMI 480
Query: 691 GKTCITCKDTPGFVVNRLLVPY 756
K + + GF VNR PY
Sbjct: 481 KKVPVVVGNCTGFAVNRTFFPY 502
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 113 bits (272), Expect = 2e-25
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Frame = +1
Query: 145 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNL-SRVAK-K 318
M + V ++GGGLMGSGIA + V L +V++ L NL SRV K
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 319 MYKDNPQEGEKFVNDSLG--RINTATDAAEASKSADLVVE---------AIVENIGVKHK 465
M K+ ++ + + R E S +++ + A+VEN+ VK +
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQ 425
Query: 466 LFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSET 645
+F L+ PSH + A+NTS++ ++ I +D+ G HFF+P VM LLE+V+ + T
Sbjct: 426 VFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHT 485
Query: 646 SEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERG 789
S +++ GK + KT + + GF VNR+ PY A+ L +RG
Sbjct: 486 SPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRG 533
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 109 bits (263), Expect = 2e-24
Identities = 67/224 (29%), Positives = 108/224 (48%)
Frame = +1
Query: 118 VRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTN 297
+ N S I V ++GGGLMGSGIA V L +V+ L N
Sbjct: 298 IPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKAN 357
Query: 298 LSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQ 477
L + K+ Q ++ + L ++ D E + AD+V+EA++E++ +K K+F
Sbjct: 358 LQSLVKR-----GQMTKEDYENKLSLLSGVLDY-EQFREADVVIEAVIEDLSLKQKIFAD 411
Query: 478 LDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEAT 657
L+ S+ I A+NTS++ ++ I +D+ G HFF+P M LLE+++ TS
Sbjct: 412 LEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQV 471
Query: 658 YKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERG 789
++ K + KT I + GF VNR+ P+ A L + G
Sbjct: 472 VIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYG 515
>02_05_0863 +
32313890-32314132,32314227-32314517,32315157-32315493,
32315944-32316278,32316763-32317010,32317296-32317881,
32317970-32318083,32318165-32318287,32318325-32318531
Length = 827
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 283 SFGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAA---EASKSADLVVEAIVEN 447
SFG N + MY D+ E + FV+ + ++N ATD + AS+ LV+ ++N
Sbjct: 614 SFGRNEDDLDLLMYSDSELEEQTFVDQEVEKVNLATDKSWEDYASREFTLVLSKTLKN 671
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 193 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGT 294
GS +AQ+S +G VTL D DA+ K + GT
Sbjct: 604 GSKLAQISEMSGATVTLADERPDAIEKVVRISGT 637
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 283 SFGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKH 462
S T +S KK D P GE+ + + G +T++D + + S++++ EN+G+
Sbjct: 73 SVATAVSLSLKKSNPD-PPTGEEGADLACGFTSTSSDRSNSGNSSEMLRFCRRENLGIGS 131
Query: 463 KL-FKQLDGVAPSHT 504
+L +L+ P+H+
Sbjct: 132 ELGGGELENAGPAHS 146
>04_03_0513 - 16681227-16683936,16685572-16685966
Length = 1034
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 226 GQNVTLVDVSNDALAKAKKSFGTNLSRVAKKMYKDNPQEGE 348
G L D SN+ + +FG+NLS ++ M N GE
Sbjct: 616 GPQTQLFDCSNNRFSSMPSNFGSNLSSISLLMASSNKLSGE 656
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 248 TSAMMLWLKPRRALAQTSAGSQRRCTKIIPKKER 349
TSA +LW +PR + G QRR ++ K+ R
Sbjct: 119 TSATLLWPRPRPTKEEEGEGLQRRTDAVLVKRLR 152
>03_03_0019 +
13786412-13786578,13786692-13786744,13787299-13787417,
13787767-13788024,13799876-13800010,13800253-13800318,
13800673-13800785,13800895-13800967
Length = 327
Score = 29.5 bits (63), Expect = 3.2
Identities = 38/157 (24%), Positives = 73/157 (46%)
Frame = +1
Query: 118 VRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTN 297
+ + S++ + A+ VT+ G +GS V++Q+G + + K K +
Sbjct: 70 ISDLSAALDSEGALPLVTL--RGQVGSETRIVASQSGCQAVIAEQQVRQHCKTK-----H 122
Query: 298 LSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQ 477
+++ AK K N ++GE+F+ + R ATD E LVV+ +G +H+ K+
Sbjct: 123 VTKSAKT--KINEKDGEEFL---VLRRTKATDGDEY-----LVVKRTRVKVGTEHRPTKR 172
Query: 478 LDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLH 588
+ + + +N S + NE+ + +D G LH
Sbjct: 173 VRDIDVEQWVHGTNVVSSTKNEVLWYL--EDATGRLH 207
>01_06_1801 -
39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 184 GLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNLSRVAKKMYKDNPQE 342
G +GS +A + A GQ+VT+ L K KSF S +A ++ ++ +E
Sbjct: 76 GEVGSVLADIIAHLGQDVTISGEYRSRLVKMTKSF-VESSLIAPRLLQERCEE 127
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 203 MPEPIRPPPITVTFLIALCIAEELEKFLTITL 108
+P+PI P P TV L+ AE E + TI+L
Sbjct: 64 LPDPIHPVPCTVADLVLDVDAESGEAYATISL 95
>06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +1
Query: 331 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIGVKHKLFKQLDGVAPSHTIF 510
+P E EK +N SL N S D + ++G+ L + DGV P H ++
Sbjct: 1076 HPDEAEKVLN-SLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVW 1134
Query: 511 ASNTSSLSINE 543
S + S+ E
Sbjct: 1135 TSFIRAASLCE 1145
>04_04_0920 + 29429114-29430934
Length = 606
Score = 29.1 bits (62), Expect = 4.3
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Frame = +1
Query: 475 QLDGVAPSHTIFASNTSSLSINEIASVVK-------RKDKFGGLHFFNPVPVMRLLEVVK 633
+ DG+AP+ TI++S SL+ +S + +K + G F V VM +E +
Sbjct: 287 EADGIAPNATIYSSIIRSLADAHESSAAEDLYNEAWKKGRLGDPDMFLKVIVMH-VEAGR 345
Query: 634 GSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYER 786
E K M E G V CI GFV R L P AIR Y++
Sbjct: 346 -VEKIMGVAKDMRETGLRV-TDCILSTIVNGFVKRRGLKP----AIRAYDK 390
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 676 WGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYER 786
W K + +T + TP V+ L + +C+A RLY R
Sbjct: 107 WLKRAAEASVTARLTPEHAVDMLKLARLCDAPRLYLR 143
>02_01_0675 - 5028910-5030379
Length = 489
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 163 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVS 255
++ V+GGG G +AQ A+AG +V +D S
Sbjct: 69 DLAVVGGGPAGLAVAQRVAEAGLSVCAIDPS 99
>12_02_0090 + 13493311-13494180
Length = 289
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 494 GATPSSCLNNLCFTPIFSTIASTTRSADLEASAASVAVLILPSESFT 354
G P S N+ F S+I +TTR+A+ + +LP+++ T
Sbjct: 209 GGMPISANRNVAFKKEGSSICATTRAAERKKRIVLQRTFVLPNQATT 255
>08_02_0277 -
15226062-15226169,15227075-15227203,15227416-15227583,
15227665-15228123,15228865-15229008
Length = 335
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 253 SNDALAKAKKSFGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVE 432
S++A A + F +L VA DN V +S +I+T+ ++AEA K + ++E
Sbjct: 192 SDNAKKYAVQGFSKSLLDVA-----DNLSRASSVVKESFSKIDTSNESAEAVKLLNTLLE 246
Query: 433 AI 438
+
Sbjct: 247 GV 248
>08_01_0945 +
9376997-9377818,9378065-9378373,9379510-9379800,
9380060-9380173,9380280-9380981
Length = 745
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 473 LNNLCFTPIFSTIASTTRSADLEASAASVAVLILPSESFTNFSPSWGLSLYI 318
L LC +F + ST + A+L + LILP SFT F L++++
Sbjct: 500 LFRLCLPAVFKSKISTWKKANLVMLFFLLRKLILPFYSFTLFCVILPLTMFV 551
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 139 SAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQN-VTLVDVSNDALAKAKKSFGTNLSRVAK 315
+A A +V VIG G +GS Q++ G + V VDV ++ L A+ T+ AK
Sbjct: 234 AAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAK 293
Query: 316 K 318
+
Sbjct: 294 E 294
>07_01_0567 -
4214196-4214351,4214539-4214845,4215005-4215069,
4215406-4215471,4215594-4215639,4215671-4216200
Length = 389
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 166 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSFGTNLSRVAKKMYKDNPQEG 345
V +GGG + + V +NVTL+D S L KA++ N + + +D P
Sbjct: 107 VVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKVALNGVNIIEGDAEDLPYPT 166
Query: 346 EKF 354
+ F
Sbjct: 167 DTF 169
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 479 SCLNNLCFTPIFSTIASTTRSADLEASAASVAVLILPSESFTNFSPSWG 333
SCL + S AS + + D + + VLI S SF N S +G
Sbjct: 1151 SCLLAASLFKLHSKSASNSTATDFDIELRDLGVLICGSSSFKNVSCGYG 1199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,542,408
Number of Sequences: 37544
Number of extensions: 436351
Number of successful extensions: 1229
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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