Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B12
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237812-1|AAG09757.1| 158|Homo sapiens NPD010 protein. 93 1e-18
AB037163-1|BAA96872.1| 158|Homo sapiens DSCR5b protein. 93 1e-18
AB035745-1|BAA95636.1| 158|Homo sapiens DSCR5b protein. 93 1e-18
BT007053-1|AAP35702.1| 134|Homo sapiens Down syndrome critical ... 93 2e-18
BC011007-1|AAH11007.1| 134|Homo sapiens phosphatidylinositol gl... 93 2e-18
BC005180-1|AAH05180.1| 134|Homo sapiens phosphatidylinositol gl... 93 2e-18
AB039659-1|BAB12395.1| 134|Homo sapiens PIG-P protein. 93 2e-18
AB037162-1|BAA96871.1| 134|Homo sapiens DSCR5a protein. 93 2e-18
AB035744-1|BAA95635.1| 134|Homo sapiens DSCR5a3 protein. 93 2e-18
AB035743-1|BAA95634.1| 134|Homo sapiens DSCR5a2 protein. 93 2e-18
AB035742-1|BAA95633.1| 134|Homo sapiens DSCR5a1 protein. 93 2e-18
AP001727-2|BAA95512.1| 108|Homo sapiens Down syndrome critical ... 67 9e-11
AF216305-1|AAF32289.1| 108|Homo sapiens Down syndrome critical ... 66 1e-10
AB037164-1|BAA96873.1| 108|Homo sapiens DSCR5c protein. 66 1e-10
>AF237812-1|AAG09757.1| 158|Homo sapiens NPD010 protein.
Length = 158
Score = 93.1 bits (221), Expect = 1e-18
Identities = 41/114 (35%), Positives = 71/114 (62%)
Frame = +2
Query: 455 NILLITKTVENLATK*PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLH 634
++ LI L+ M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+
Sbjct: 7 SLTLIVFLFHRLSKAPGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLN 66
Query: 635 YFNIYYYPQKYWSTALPIQFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
+ Y+PQKYW+ ALP+ L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 67 SLGLTYWPQKYWAVALPVYLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 119
>AB037163-1|BAA96872.1| 158|Homo sapiens DSCR5b protein.
Length = 158
Score = 93.1 bits (221), Expect = 1e-18
Identities = 41/114 (35%), Positives = 71/114 (62%)
Frame = +2
Query: 455 NILLITKTVENLATK*PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLH 634
++ LI L+ M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+
Sbjct: 7 SLTLIVFLFHRLSKAPGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLN 66
Query: 635 YFNIYYYPQKYWSTALPIQFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
+ Y+PQKYW+ ALP+ L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 67 SLGLTYWPQKYWAVALPVYLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 119
>AB035745-1|BAA95636.1| 158|Homo sapiens DSCR5b protein.
Length = 158
Score = 93.1 bits (221), Expect = 1e-18
Identities = 41/114 (35%), Positives = 71/114 (62%)
Frame = +2
Query: 455 NILLITKTVENLATK*PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLH 634
++ LI L+ M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+
Sbjct: 7 SLTLIVFLFHRLSKAPGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLN 66
Query: 635 YFNIYYYPQKYWSTALPIQFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
+ Y+PQKYW+ ALP+ L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 67 SLGLTYWPQKYWAVALPVYLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 119
>BT007053-1|AAP35702.1| 134|Homo sapiens Down syndrome critical
region gene 5 protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>BC011007-1|AAH11007.1| 134|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class P protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>BC005180-1|AAH05180.1| 134|Homo sapiens phosphatidylinositol
glycan anchor biosynthesis, class P protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>AB039659-1|BAB12395.1| 134|Homo sapiens PIG-P protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>AB037162-1|BAA96871.1| 134|Homo sapiens DSCR5a protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>AB035744-1|BAA95635.1| 134|Homo sapiens DSCR5a3 protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>AB035743-1|BAA95634.1| 134|Homo sapiens DSCR5a2 protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>AB035742-1|BAA95633.1| 134|Homo sapiens DSCR5a1 protein.
Length = 134
Score = 92.7 bits (220), Expect = 2e-18
Identities = 38/96 (39%), Positives = 65/96 (67%)
Frame = +2
Query: 509 MPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPI 688
M E++P+P P R++YGF L+L S+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 689 QFLVALTVFAFLIYPSINMILTPHIDSPNTFQDKFS 796
L+A+ + L++ INM+ T +DS +T D ++
Sbjct: 61 YLLIAIVIGYVLLF-GINMMSTSPLDSIHTITDNYA 95
>AP001727-2|BAA95512.1| 108|Homo sapiens Down syndrome critical
region protein C protein.
Length = 108
Score = 66.9 bits (156), Expect = 9e-11
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +2
Query: 587 LTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPIQFLVALTVFAFLIYPSINMILTPHID 766
+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+ L+A+ + L++ INM+ T +D
Sbjct: 1 MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAIVIGYVLLF-GINMMSTSPLD 59
Query: 767 SPNTFQDKFS 796
S +T D ++
Sbjct: 60 SIHTITDNYA 69
>AF216305-1|AAF32289.1| 108|Homo sapiens Down syndrome critical
region protein C short form protein.
Length = 108
Score = 66.5 bits (155), Expect = 1e-10
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +2
Query: 587 LTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPIQFLVALTVFAFLIYPSINMILTPHID 766
+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+ L+A+ + L++ INM+ T +D
Sbjct: 1 MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAVVIGYVLLF-GINMMSTSPLD 59
Query: 767 SPNTFQDKFS 796
S +T D ++
Sbjct: 60 SIHTITDNYA 69
>AB037164-1|BAA96873.1| 108|Homo sapiens DSCR5c protein.
Length = 108
Score = 66.5 bits (155), Expect = 1e-10
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +2
Query: 587 LTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPIQFLVALTVFAFLIYPSINMILTPHID 766
+ ++ +WAF P+S+L+ + Y+PQKYW+ ALP+ L+A+ + L++ INM+ T +D
Sbjct: 1 MVLYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYLLIAVVIGYVLLF-GINMMSTSPLD 59
Query: 767 SPNTFQDKFS 796
S +T D ++
Sbjct: 60 SIHTITDNYA 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,499,705
Number of Sequences: 237096
Number of extensions: 2330592
Number of successful extensions: 4517
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4503
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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