Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B09
(762 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667 38 0.007
07_03_1548 + 27630988-27631049,27631632-27631767,27631904-276320... 38 0.009
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 36 0.027
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 36 0.047
09_04_0430 + 17502387-17503505 33 0.19
09_06_0081 + 20745627-20748144,20748211-20748308 32 0.57
03_06_0416 - 33780911-33781861 29 4.0
02_02_0363 + 9446055-9446524,9446658-9446771,9446856-9447281,944... 29 4.0
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 29 5.3
09_02_0546 - 10454404-10455687 28 7.1
06_01_0068 - 572964-573323 28 7.1
05_03_0212 + 10260690-10261272,10261921-10262435,10262446-102625... 28 7.1
10_01_0115 - 1426573-1426590,1426838-1426912,1427106-1427464,142... 28 9.3
05_01_0248 - 1864092-1864204,1864570-1864608,1864661-1864730,186... 28 9.3
04_04_0788 + 28064684-28066584,28066692-28066815,28066908-280672... 28 9.3
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 28 9.3
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 9.3
>01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667
Length = 569
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Frame = +2
Query: 251 CGDSVCGTDLEDHIRDSCAQTIKTCRFC-----------ELELPRRELPPHENYCGVRTE 397
CG + D+ H +C + CRFC + R + HE+ CG RT
Sbjct: 485 CGVVLEKEDMVQHQSSTCPLRLIVCRFCGDTVQAGGEPLDARDRLRNMCEHESICGSRTA 544
Query: 398 QCPDCREWVMIKYRQLHLDSNH 463
C C VM+K +H+ + H
Sbjct: 545 PCDSCGRSVMLKDMDIHVIAVH 566
>07_03_1548 +
27630988-27631049,27631632-27631767,27631904-27632041,
27632168-27632267,27632443-27632552
Length = 181
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 311 TIKTCRFCELELPRRELPPHENYCGVRTEQCPDCREWVMIKYRQLHLDSNH 463
T TC C E+P + H +C ++C C V K H D NH
Sbjct: 14 TTATCAHCHREIPSPNIALHSAHCARNLQKCEHCGYMVPKKLMDEHYDENH 64
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 242 CKQCGDSVCGTDLEDHIRDSCAQTIKTCRFCELELPRRELPPHEN 376
C C +V + H C Q + C++C+ ELP ++ H+N
Sbjct: 69 CSLCQKTVQRELWDLHKGLQCPQRMLACQYCDFELPAADIYEHQN 113
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 36.3 bits (80), Expect = 0.027
Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 513 PDCPAPGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPLRGKTISLR 692
P AP A PP APRG TT R S G + + +P P L LR LR
Sbjct: 675 PHIRAPSMAAPPPAAPRGRTMPPTTGRYSFSYGGLSLSY-TTPRGPIAPLSLRSPAPHLR 733
Query: 693 S-TLPWRPPIKCGRISPYP 746
+ +P PP +P P
Sbjct: 734 ARRVPTAPPAAARPRAPTP 752
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 537 ARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPLRGKTISLRSTLPWRPP 716
+R PPT +G S T+ R+ + R+ +SP+ P RR+P R + R ++ R P
Sbjct: 552 SRSPPTMDKGRSISRTSGRLPLR-----RSISRSPDRPYRRIPSRSPRKNTRRSIS-RSP 605
Query: 717 IKCGR--ISPYPGGQ 755
++ + ISP GG+
Sbjct: 606 VRLSKRSISPVRGGR 620
>09_04_0430 + 17502387-17503505
Length = 372
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +3
Query: 522 PAPGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAP 650
P P RA T PR +P ST R+ P TA A P AP
Sbjct: 183 PTPPRAPPQSTPPRAAPQSTPPQRVAPQPPATAAAPPIEPVAP 225
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +3
Query: 513 PDCPAPGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPLRGKTISLR 692
P P P RA PT PR P ST +AP + + +P+ P + ++
Sbjct: 171 PPQPTPPRAAPLPTPPRAPPQSTPP----RAAPQSTPPQRVAPQPPATAAAPPIEPVAPP 226
Query: 693 STLPWRPPIKCGRISPY 743
S W + C I Y
Sbjct: 227 SPTFWTVCMSCCHIHQY 243
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 31.9 bits (69), Expect = 0.57
Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 513 PDCPAPGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPLRGKTISLR 692
P AP A PP APRG TT R S G + + P AP L LR LR
Sbjct: 644 PHLRAPPVATPPPAAPRGWTMPTTIGRYSFSYGGVSLSY-AMPCAPTAPLSLRLPAPHLR 702
Query: 693 S-TLPWRPPIKCGRISPYP 746
+ P PP +P P
Sbjct: 703 ARRAPTSPPAAATPRAPTP 721
>03_06_0416 - 33780911-33781861
Length = 316
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/83 (33%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 501 QGCCPDCP-APGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPLRGK 677
Q P P PGR R PP A +P T R S + R S A LR
Sbjct: 39 QCAIPASPHTPGRGRAPPPATPRAPRPEITLRQPSSQAQQKQKRAPSAAARRPSRALRAI 98
Query: 678 TISLRSTLPWRPPIKCGRISPYP 746
LRS LP+ P C S P
Sbjct: 99 RALLRS-LPFVAPAACRPSSALP 120
>02_02_0363 +
9446055-9446524,9446658-9446771,9446856-9447281,
9447812-9447893,9447964-9448020,9448633-9448881,
9448978-9449109,9449163-9449291
Length = 552
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 522 PAPGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPLRGKTISLR 692
P P PPT P+ T + + AP TA AR P A R++P G S R
Sbjct: 101 PLPTPPPPPPTQPQPEQQKPVTVQENLPAPTTAPARASQP-AAARQVPAGGVPRSKR 156
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 537 ARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPG--RRLPL-RGKTISLRSTLPW 707
A P +GSP R+ +S+P D EAPG + PL RG+ ++RS+
Sbjct: 66 AEEDPREKKGSPLPRGR-RVTVSSPEVVNLDDSDEEAPGQSKDAPLPRGRRGTVRSSKLI 124
Query: 708 RP 713
RP
Sbjct: 125 RP 126
>09_02_0546 - 10454404-10455687
Length = 427
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 9/48 (18%)
Frame = +2
Query: 221 NYVRIVPCKQCGD---------SVCGTDLEDHIRDSCAQTIKTCRFCE 337
N + + C +CG+ S C EDH D C + TC FCE
Sbjct: 196 NKIELKACSRCGEIGHVASSCASTCVHCEEDHPPDRCPTSRITCFFCE 243
>06_01_0068 - 572964-573323
Length = 119
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 523 QHQAERGSRQRRRAGLHIRQLREEY*SRHRGLRERGTSPRRLRG 654
Q + +R RQ R LH+R++ + + H G R RR G
Sbjct: 14 QRRRQREERQLRDEPLHLRRVLRQRGTHHDGKHRRSRGRRRQHG 57
>05_03_0212 +
10260690-10261272,10261921-10262435,10262446-10262569,
10262840-10263042,10263169-10263240,10264905-10265007,
10265350-10265582
Length = 610
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 424 DPLPAVGTLLGADAAVVLVGRQLATRQLQLTKPACFD 314
DPLP + +LGA+ V+V R A L P+ FD
Sbjct: 554 DPLPPLLFVLGAELLQVIVNRAYAMGHLSKPFPSDFD 590
>10_01_0115 -
1426573-1426590,1426838-1426912,1427106-1427464,
1427551-1427656,1428091-1428207,1428319-1428420,
1428520-1428613,1428697-1428746,1429029-1429106,
1429189-1429455,1429573-1429672,1429757-1430039,
1430312-1430357
Length = 564
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = -3
Query: 463 VVGVQMQLPVFDHDPLPAVGTLLGADAAVVLVGRQLATRQLQLTKPACFDGLSTRVSDVV 284
V+ + L V + P +G LGA + + +QL+ ++ A + + R+SD+
Sbjct: 435 VMSIATMLRVSRNMPKKVLGATLGAQSTSKIQAQQLSKISMEAVSAAEYASSTKRLSDIE 494
Query: 283 FQVRSADTIPTLLTRNNSDII 221
+V + T P + + +++
Sbjct: 495 EKVIAILTKPAEMPADKEEML 515
>05_01_0248 -
1864092-1864204,1864570-1864608,1864661-1864730,
1864976-1865043,1866114-1866201,1866282-1866309,
1866406-1866451,1866571-1866796
Length = 225
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 546 PPTAPRGSP-YSTTT*RILISAPGTARARD-QSPEAPGRRLP 665
PP +PR P +TTT R+L+++ R + AP RRLP
Sbjct: 22 PPASPRPPPTTTTTTSRLLLASRSRGLQRPLRVNHAPPRRLP 63
>04_04_0788 +
28064684-28066584,28066692-28066815,28066908-28067285,
28067286-28067488,28067615-28067897
Length = 962
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 605 GTGDCESAGPVPGGSGAKAPFKRKNDQPQ 691
G+G SA PGG G F KN PQ
Sbjct: 83 GSGSVSSASSSPGGGGNGESFSFKNRPPQ 111
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 522 PAPGRARVPPT-APRGSPYSTTT*RILISAPGTARARDQSPEAPGRRLPL 668
P P +R PP P SP +TTT + PG A+A D +P+ G P+
Sbjct: 577 PKPAASRRPPVHPPPPSPATTTTTPL---PPGDAQA-DHAPDGGGGSTPV 622
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 513 PDCPAPGRARVPPTAPRGSPYSTTT*RILISAPGTARARDQSPEAPGR 656
P P P R +P P +P T + +AP AR +P AP R
Sbjct: 130 PPPPPPARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPSAPPR 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,791,337
Number of Sequences: 37544
Number of extensions: 407652
Number of successful extensions: 1533
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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