SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_B05
         (532 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030991-1|AAH30991.1|  192|Homo sapiens OR7E91P protein protein.      30   5.8  
BC014374-1|AAH14374.1|  167|Homo sapiens OR7E91P protein protein.      30   5.8  

>BC030991-1|AAH30991.1|  192|Homo sapiens OR7E91P protein protein.
          Length = 192

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 26  CHLP**SCK-SLCCYSPLR*SWNAVTLSSAPASIGPWSTTMTCSTARKCSVRELKTSISA 202
           C +P  SC   LCC SP    W ++ LS    ++   S  +  +++  CS      SI  
Sbjct: 120 CWIP--SCAVGLCCNSPSSRMWKSLILSVTHLNLS--SLPVLTASSIACSY----ISIVL 171

Query: 203 CLMYLPYSG 229
           CL++ P+ G
Sbjct: 172 CLVFFPFQG 180


>BC014374-1|AAH14374.1|  167|Homo sapiens OR7E91P protein protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +2

Query: 26  CHLP**SCK-SLCCYSPLR*SWNAVTLSSAPASIGPWSTTMTCSTARKCSVRELKTSISA 202
           C +P  SC   LCC SP    W ++ LS    ++   S  +  +++  CS      SI  
Sbjct: 95  CWIP--SCAVGLCCNSPSSRMWKSLILSVTHLNLS--SLPVLTASSIACSY----ISIVL 146

Query: 203 CLMYLPYSG 229
           CL++ P+ G
Sbjct: 147 CLVFFPFQG 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,168,634
Number of Sequences: 237096
Number of extensions: 1303930
Number of successful extensions: 2637
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -