Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B01
(463 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 33 0.19
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 33 0.19
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 33 0.19
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 33 0.19
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 33 0.19
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 33 0.19
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 33 0.25
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 33 0.25
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 30 1.3
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 30 1.3
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 30 1.3
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 30 1.3
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 30 1.3
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 29 2.3
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 29 2.3
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 29 2.3
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 29 2.3
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 29 2.3
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 29 2.3
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 29 2.3
AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p pro... 29 3.0
AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,... 29 3.0
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 29 4.0
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 29 4.0
BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p pro... 28 7.0
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 27 9.3
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 27 9.3
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G YA V NNGS
Sbjct: 116 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G YA V NNGS
Sbjct: 119 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 116 ECENATSLSLMIDSLLAXYDRDSPPD---SKIVINLTLHXRHAN-IRESESTVRIQADLX 283
+ N ++S ++D+LL YD PD I + + R I E + T +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 284 MNWIDKRLSWNAGE 325
+W+DKRL++ +
Sbjct: 162 QSWVDKRLAFEGAQ 175
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 116 ECENATSLSLMIDSLLAXYDRDSPPD---SKIVINLTLHXRHAN-IRESESTVRIQADLX 283
+ N ++S ++D+LL YD PD I + + R I E + T +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 284 MNWIDKRLSWNAGE 325
+W+DKRL++ +
Sbjct: 162 QSWVDKRLAFEGAQ 175
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + +W+PDV++ N+A G Y V NNGS
Sbjct: 390 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + +W+PDV++ N+A G Y V NNGS
Sbjct: 389 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 423
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + +W+PDV++ N+A G Y V NNGS
Sbjct: 341 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 375
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + +W+PDV++ N+A G Y V NNGS
Sbjct: 390 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + +W+PDV++ N+A G Y V NNGS
Sbjct: 390 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 111 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 156
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V +NGS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHNGS 141
>AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p
protein.
Length = 1012
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 352 GHQPSXAAPLPCVPTQSFVDPIHXKICLYSHGGLGLTNVSMSXMQGQVD 206
GHQ APL QSF+D + K +GG TN + +Q Q D
Sbjct: 784 GHQIGKPAPLFAKLEQSFIDELKGK-----YGGAQATNDAAQAVQAQAD 827
>AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,
isoform D protein.
Length = 1582
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 435 HGRGERSPRRWXQPRLAVP-RQASTXRSEDTSQVXQPHSPAFQLS 304
H RG+R+P + ++ +ST SED S P+S QLS
Sbjct: 44 HSRGQRNPSEYHGVATSLSCADSSTGSSEDASDPGSPYSAHSQLS 88
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 107 SAAECENATSLSLMIDSLLAXYDRDSPPDSKIVINLTLHXRHANIRESES 256
S + E A+SL+L ++SLL YD+ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 107 SAAECENATSLSLMIDSLLAXYDRDSPPDSKIVINLTLHXRHANIRESES 256
S + E A+SL+L ++SLL YD+ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>BT025952-1|ABG02196.1| 93|Drosophila melanogaster IP15265p
protein.
Length = 93
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 107 SAAECENATSLSLMIDSLLAXYDRDSPPDSKIVINLTLHXRHANIRESES 256
S + E A+SL+L ++SLL YD+ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-ERCKSVTLLPLPSNSGSISESSS 76
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLL-NAAXTTAGDYALRARVSNNGSXSW 461
P + +WRPD+VL NA A +A + + G W
Sbjct: 118 PSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEW 155
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 315 TQGSGAAXLGWCPRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
T+ G L P N LW+PDV++ N+A G Y V ++GS
Sbjct: 96 TEYGGVKDLRITP-NKLWKPDVLMYNSADEGFDGTYHTNIVVKHSGS 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,839,036
Number of Sequences: 53049
Number of extensions: 358673
Number of successful extensions: 946
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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