Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_B01
(463 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 37 9e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.001
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.011
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.018
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.018
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.024
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.024
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.032
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.032
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.032
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.032
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.032
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 28 0.056
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.074
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.098
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.13
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 26 0.17
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.17
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 26 0.23
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.40
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 1.6
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 6.5
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 6.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.1 bits (82), Expect = 9e-05
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 119 CENATSLSLMIDS---LLAXYDRDSPPDSKIV--INLTLHXRHANIRESESTVRIQADLX 283
C++ TS S + L YDRD P+ K I+ L +H N+ E TV L
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 284 MNWIDKRLSWNAGEW 328
+ W L+W + E+
Sbjct: 88 LMWEQSHLTWKSSEF 102
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.001
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 125 NATSLSLMIDSLLAXYDRDSPPD---SKIVINLTLHXRHAN-IRESESTVRIQADLXMNW 292
N +++S ++D+LL YD PD + + + R I E + T + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 293 IDKRLSWNAGE 325
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.011
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
P + LW+PDV++ N+A G Y V NNG+
Sbjct: 101 PPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 22.2 bits (45), Expect = 2.8
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +2
Query: 278 LXMNWIDKRLSWNAGEWG 331
L + W D + WN ++G
Sbjct: 76 LKLEWNDVNMRWNVSDYG 93
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.5 bits (63), Expect = 0.018
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V++NGS
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.5 bits (63), Expect = 0.018
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V++NGS
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.024
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V++NGS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.024
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Frame = +2
Query: 101 IASAAECENATSLSLMIDSLLAXYDRDSPPDSK----IVINLTLHXRHA---NIRESEST 259
I SA C + D LL+ Y+R P S +V+ L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 260 VRIQADLXMNWIDKRLSWNAGEWGCXTWL-VSSE 358
+ L W D + W+ E+G T L V SE
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSE 100
Score = 23.4 bits (48), Expect = 1.2
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 345 WCPRNALWRPDVVLLNAAXTTAGDYAL-RARVSNNGSXSW 461
+ P +W PD+VL N A G + +A + G W
Sbjct: 96 YVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 27.1 bits (57), Expect = 0.098
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V+++GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 27.1 bits (57), Expect = 0.098
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V+++GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 27.1 bits (57), Expect = 0.098
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V+++GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 27.1 bits (57), Expect = 0.098
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V+++GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.032
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
++ E + A L + W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 27.1 bits (57), Expect = 0.098
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 357 NALWRPDVVLLNAAXT-TAGDYALRARVSNNGS 452
N LW+PD+++ N+A G Y V+++GS
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.056
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXTTAGDYALRAR--VSNNGSXSW 461
P N +WRPD +L N A + VS+ G W
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 200 IVINLTLHXRHANIRESESTVRIQADLXMNWIDKRLSWNAGEW 328
+V L+LH ++ E + + W D L WNA E+
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEF 74
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.074
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLL-NAAXTTAGDYALRARVSNNGSXSW 461
P + +WRPD+VL NA A +A + + G W
Sbjct: 106 PSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 20.6 bits (41), Expect = 8.5
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 287 NWIDKRLSWNAGEWG 331
+W D +L W E+G
Sbjct: 84 SWYDYKLRWEPKEYG 98
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.1 bits (57), Expect = 0.098
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 351 PRNALWRPDVVLL-NAAXTTAGDYALRARVSNNGSXSW 461
P + +WRPD+VL NA A +A ++ G W
Sbjct: 102 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 23.8 bits (49), Expect = 0.92
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Frame = +2
Query: 119 CENATSLSLMIDSLLAXYDRDSPPDSKIVINLTLHXR-------HANIRESESTVRIQAD 277
C + D LL+ Y++ P + LT+ + N++ T + +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 278 LXMNWIDKRLSWNAGEWG 331
+W D +L W+ E+G
Sbjct: 79 --QSWYDYKLKWDPKEYG 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 26.6 bits (56), Expect = 0.13
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAAXTTAGDYALRAR----VSNNGSXSW 461
P + +W+PD+VL N A G+Y +R + + NG W
Sbjct: 104 PPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLW 141
Score = 24.2 bits (50), Expect = 0.69
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
N+ E ++ L W D +L W+ ++G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.17
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +2
Query: 146 MIDSLLAXYDRDSPP------DSKIVINLTLHXRH-ANIRESESTVRIQADLXMNWIDKR 304
++D++L YD P D ++ + L R A I + + +Q W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 305 LSWN 316
L +N
Sbjct: 95 LRFN 98
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.17
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 327 GAAXLGWCPRNALWRPDVVLLNAAXTTAGDYAL----RARVSNNGSXSW 461
G + + P +W PD+VL N A G+Y + +A + G SW
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSW 148
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 236 NIRESESTVRIQADLXMNWIDKRLSWNAGEWG 331
N++ T + + W D +L WN E+G
Sbjct: 74 NLKNQVMTTNVWVE--QRWNDYKLKWNPEEYG 103
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.8 bits (54), Expect = 0.23
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAA 398
P + +WRPD+VL N A
Sbjct: 106 PSDHIWRPDIVLYNNA 121
Score = 20.6 bits (41), Expect = 8.5
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 287 NWIDKRLSWNAGEWG 331
+W D +L W E+G
Sbjct: 84 SWYDYKLRWEPKEYG 98
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.0 bits (52), Expect = 0.40
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Frame = +2
Query: 92 TCAIASAAECENATSLSLMIDSLLAXYDRDSPP----DSKIVINLTLHXRH---ANIRES 250
+C +A + + D LL+ Y+R P ++ + + L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 251 ESTVRIQADLXMNWIDKRLSWNAGEWG 331
T + + W D +L WN ++G
Sbjct: 66 IMTTNVWVE--QEWNDYKLKWNPDDYG 90
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 351 PRNALWRPDVVLLNAA 398
P +W PD+VL N A
Sbjct: 98 PSEHIWLPDIVLYNNA 113
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.0 bits (47), Expect = 1.6
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +2
Query: 122 ENATSLSLMIDSLLAXYDRDSPPDS--KIVINLTLHX--RHANIRESESTVRIQADLXMN 289
++ T+L + L YD + P S +I N+T+ + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 290 WIDKRLSWNAGEW 328
W D LSW ++
Sbjct: 99 WTDSHLSWKPSDF 111
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 357 NALWRPDVVLLNA 395
++LW+PD LNA
Sbjct: 69 DSLWQPDPYFLNA 81
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 6.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 197 KIVINLTLHXRHANIRESESTVRIQADLXMNWID 298
KIV++ L ES R+QAD+ + D
Sbjct: 499 KIVLSTILRNFRVRSDVKESEFRLQADIILKRAD 532
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 96 QVRRNGNKNNISRRHFM 46
++ RNG N + RRH +
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 96 QVRRNGNKNNISRRHFM 46
++ RNG N + RRH +
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 96 QVRRNGNKNNISRRHFM 46
++ RNG N + RRH +
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 96 QVRRNGNKNNISRRHFM 46
++ RNG N + RRH +
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,383
Number of Sequences: 438
Number of extensions: 1945
Number of successful extensions: 44
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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