Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_A21
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 62 9e-11
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 53 5e-08
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 48 2e-06
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 48 2e-06
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 42 1e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 29 0.76
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 29 0.76
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 27 3.1
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 27 4.1
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 26 5.4
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 26 7.1
SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.4
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 25 9.4
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 62.1 bits (144), Expect = 9e-11
Identities = 33/79 (41%), Positives = 41/79 (51%)
Frame = +1
Query: 412 RFSRLERYATETNKLLIRLDKLICNMPSDPHQRKIHEQDAVPWLDGSSVNLCPNCAKPFH 591
R +LE T N + LD L+ N + K EQ V W D S V +CP C F
Sbjct: 238 RMKKLEELWTSENVSM--LDALLLN------KAKRLEQSIVHWQDDSVVQICPECNNSFT 289
Query: 592 LTRRQHHCRLCGSILCHDC 648
LTRR+ HCRLCG ++C C
Sbjct: 290 LTRRRRHCRLCGRVICRFC 308
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 568 PNCAKPFHLTRRQHHCRLCGSILCHDCSVF 657
P C K + HCR CG I C+ S++
Sbjct: 143 PMCDKLLNFINGHIHCRKCGYIFCNFHSMY 172
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 52.8 bits (121), Expect = 5e-08
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 505 QRKIHEQDAVPW-LDGSSVNLCPNCAKPFHLTRRQHHCRLCGSILCHD-CSVFLDIEVAK 678
+R + E A W LD S C NC PF RR+HHCR CG + C++ C+ F + V+
Sbjct: 13 RRLLIETPAAIWQLDDESAQ-CNNCGGPFTWFRRRHHCRWCGKLFCYNCCNSFAKLPVSS 71
Query: 679 TIINPS 696
++P+
Sbjct: 72 VSVDPT 77
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 47.6 bits (108), Expect = 2e-06
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 538 WLDGSSVNLCPNCAKPFHLTRRQHHCRLCGSILCHDC 648
W+ N C C F L RR+HHCR+CG I+C C
Sbjct: 57 WMKDERTNNCSLCETEFTLFRRKHHCRICGKIICKYC 93
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 490 PSDPHQRKIHEQDAVPWLDGSSVNLCPNCAKPFHLTRRQHHCRLCGSILCHDCS 651
PS K + + P D + +C C PF T R+HHCR CG + C+ CS
Sbjct: 153 PSQNITSKFLDTETPP--DWTDSEVCLRCRTPFTFTNRKHHCRNCGGVFCNQCS 204
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 538 WLDGSSVNLC--PNCAKPFHLTRRQHHCRLCGSILC 639
W S V++C P+C+ F L R+HHCR CG I C
Sbjct: 151 WKPDSDVSVCSFPSCSVRFGLFDRRHHCRRCGDIFC 186
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 29.1 bits (62), Expect = 0.76
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 142 EGFLCPICKADLKSASQLTNHFESLHQEDQ 231
+ F+CP C K + L H SLH ++
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEK 450
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 29.1 bits (62), Expect = 0.76
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 562 LCPNCAKPFHLTRRQHHCRLCG-SILCHDCSVFLDIEVAKT 681
LC C F L + CR CG S +C DC L KT
Sbjct: 2555 LCSLCDSRFSLMEWRSQCRACGNSNVCSDCVSMLKDTNIKT 2595
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +1
Query: 118 TANDDEILEG-------FLCPICKADLKSASQLTNHFESLHQEDQDVLKSLKDIFGKAKT 276
T++DDE L +C +C + +S +QL NH E+ + +++ K ++I AK
Sbjct: 253 TSSDDESLSKEIVNSNPIMCMVCNKNFRSQNQLENH-ENSKKHKKNLRKMNQEIKKHAKE 311
Query: 277 IILNNEN 297
N E+
Sbjct: 312 AQKNAES 318
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 262 GKAKTIILNNENADLKETFARALKFNYQDYYDEEQVIGVSRSSTDYFKGVRF 417
G+ T+I ++ N D + A+ D YD E+ I + R +Y+K +++
Sbjct: 53 GRVPTLI-DHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYKVIQY 103
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 664 YLEKQSSHDIVWSHIVDN 611
Y +K SS +VWS++V+N
Sbjct: 314 YTDKVSSGPVVWSYVVEN 331
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/35 (25%), Positives = 15/35 (42%)
Frame = +1
Query: 154 CPICKADLKSASQLTNHFESLHQEDQDVLKSLKDI 258
CP C+ K L H + H + + + KD+
Sbjct: 61 CPYCEIKCKRKDLLKRHIQRFHNDKSVIEEGSKDV 95
>SPAC5D6.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 314
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 538 WLDGSSVNLCPNCAKPFHLTR 600
++DG +++ PN +P HL R
Sbjct: 60 FIDGHKIHVNPNAVEPLHLRR 80
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 145 GFLCPICKADLKSASQLTNHFESLHQ-EDQDVLKSLKDIFGKAKTIILNNENADLKETFA 321
GF+CP+C + K T + +D + SL D + IL N ++
Sbjct: 262 GFICPLCSKNSKDVLCNTGFVSGVSSGQDLVIPPSLAD---RESLSILVNYCKSIRFRCF 318
Query: 322 RALKFNYQDYYDEEQVIGVSRSSTDYFK 405
R + Y Y D + + R+ T + K
Sbjct: 319 RCRRVEYFFYLDSNP-LSIQRTITHFIK 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,890,010
Number of Sequences: 5004
Number of extensions: 54830
Number of successful extensions: 204
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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