Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_A09
         (603 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0557 + 30219270-30219764                                         33   0.17 
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72...    28   5.0  
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184...    28   5.0  
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    28   6.5  

>01_06_0557 + 30219270-30219764
          Length = 164

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = +1

Query: 76  RSALE-PIPDKFNGLQGCYIRXVRWCPSL*FCNILEGSRMHPILLRARCCHTPIV*R*AE 252
           R+A+E P PD+   L G +    RW PS+  C  +EG+   P  +  R C  P V + AE
Sbjct: 19  RAAVEGPTPDQAWALLGDFCSLHRWVPSVQTCRRVEGAEGQPGCV--RYCAGP-VNKAAE 75

Query: 253 -----QRHPCVYLYKARRKYSHNLCSLNKAF 330
                 +   V      R+YS+ +   NK F
Sbjct: 76  AVAGWSKERLVEFDPVARRYSYEVVETNKGF 106


>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
            725738-725840,726106-726264,726728-726846,726891-727004,
            727119-727277,727404-727451,728464-728640,729064-729116,
            729549-729661,729793-729873,729966-730081,730786-730905,
            732321-732429,732593-732770,732852-732920,733102-733233,
            733657-733766,733843-734003,734081-734171,734258-734355,
            734499-734619,734732-734892,734985-735090,735142-735236,
            735828-735852,736008-736084,736196-736282,736372-736421,
            736558-736639,736735-736795,737064-737116,737206-737395,
            737472-737595,737860-737962,738064-738156,740344-740422,
            740508-740584,740915-741043,742614-742731,742816-742913,
            743457-743546,744998-745123,745238-745351,745488-745611,
            745865-746019,746104-746201,746357-746600
          Length = 1926

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = -3

Query: 457  IKNNIQAANIMKIKENILFLLMNRSHYLKSL----KFLPVY--LVIFSR-RLCLKNTDYV 299
            I  N++A   ++   N LF+ M  +  +  +     F P Y   V++S   LC++N D +
Sbjct: 1043 IPKNLEAQRRLQFFTNSLFMDMPAAKPVSEMIPFSVFTPYYSETVLYSMSELCVENEDGI 1102

Query: 298  SIFFWLCK 275
            SI F+L K
Sbjct: 1103 SILFYLQK 1110


>04_01_0162 +
           1845295-1846317,1846430-1846565,1848436-1848626,
           1848780-1848887,1849001-1849204,1849294-1849525,
           1849602-1849751,1849830-1850007,1850416-1850519,
           1850611-1850933,1851274-1851459,1851672-1851899
          Length = 1020

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/67 (22%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
 Frame = -3

Query: 499 KLSFQNYIIHEIYMIKNNIQAANIMKIKE-NILFLLMNRSH----YLKSLKFLPVYLVIF 335
           +++ +N +  ++  ++  +Q   +  +KE   L+++ +R      Y +SL+FLP+Y++  
Sbjct: 774 RIAVENSLSDKLDSVRQQLQLKLVRSLKEYRNLYVVQHRIGGRLIYPESLRFLPLYILSI 833

Query: 334 SRRLCLK 314
            + L L+
Sbjct: 834 CKSLALR 840


>09_06_0317 - 22265786-22267618,22267874-22268446,22268546-22268677,
            22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 245  ELSSDTPVCTFTKPEENTHIICVL 316
            +LSS+  VC F  P + + IIC L
Sbjct: 960  DLSSEEEVCEFMVPADESQIICAL 983


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,658,871
Number of Sequences: 37544
Number of extensions: 250032
Number of successful extensions: 554
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)