Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_A09
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79602-3|CAB01890.1| 474|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL132860-1|CAB60513.2| 616|Caenorhabditis elegans Hypothetical ... 29 1.9
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 5.9
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 5.9
AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical... 27 7.8
>Z79602-3|CAB01890.1| 474|Caenorhabditis elegans Hypothetical
protein K09E9.3 protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 407 YIFFNFHDVCCLNIIFYHIYFM 472
Y+F H V CLNI ++H+YF+
Sbjct: 452 YLFI-IHPVFCLNITYFHLYFI 472
>AL132860-1|CAB60513.2| 616|Caenorhabditis elegans Hypothetical
protein Y56A3A.2 protein.
Length = 616
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 134 GXFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPEENTHIICV 313
G D LP+ V +E + T+Y C H + Q ++ P T P + ICV
Sbjct: 430 GGRDDALPYGGVAQPEEKKITKYSCLHARYVVQQAL--CNASEPCKTEETPAAHQEKICV 487
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 310
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 310
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 310
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 310
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 310
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 173 YSKEAECTRYFCAHDAVIHQS-CKDELSSDTPVCTFTKPEENTHIIC 310
Y + E ++ A D ++ Q C+DE SSD V T K I C
Sbjct: 310 YKSDTETCQFTVATDDLVDQEHCEDEKSSDRMVDTVEKTMIPVQITC 356
>AC084154-10|AAK29873.1| 1140|Caenorhabditis elegans Hypothetical
protein Y22D7AR.2 protein.
Length = 1140
Score = 27.5 bits (58), Expect = 7.8
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = -3
Query: 514 NISIFKLSFQNYIIHEIYMIKNNIQAANIMKIKENILFL-LMNRSHYLKSLKFLPVYLVI 338
+IS L+ + E + KN++ + + K++ENI L + L++ ++ +
Sbjct: 411 HISYPSLNLVYKAVAEFFPYKNSLDGSLLSKVQENINHLSKLAVEMKLEAPMISQLHKMF 470
Query: 337 FSRRLCLKNTDYVSIFFWLCKGTHRGVAAQLIFTRLVYDSIVRAEVSGAFCFLRVCYRIK 158
SR LKNTD + L G Q+IF L D + A+ ++ ++K
Sbjct: 471 LSR--SLKNTDNIKFISGLLNGIS---DIQMIFNDLRNDWVNETVAGQAYNLVKALNQLK 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,668,788
Number of Sequences: 27780
Number of extensions: 245440
Number of successful extensions: 603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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