Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_A03
(757 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0433 + 3353255-3353374,3353532-3353828 182 4e-46
10_08_0018 + 14164103-14164225,14164596-14164892 176 1e-44
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 151 6e-37
12_02_0605 - 20924385-20924606,20924705-20924899 123 1e-28
12_02_0151 - 14468480-14468698,14468902-14469090 119 2e-27
07_03_0790 + 21536389-21536577,21536854-21537072 119 2e-27
07_03_0791 + 21539069-21539257,21539493-21539711 118 5e-27
03_05_0949 + 29089293-29089487,29089592-29089810 118 7e-27
05_05_0119 - 22512228-22512500,22512577-22512795 112 3e-25
03_02_0562 - 9469263-9469517,9469619-9469843 108 4e-24
05_01_0107 + 706936-707202,707231-707485 92 5e-19
08_02_0735 + 20564451-20564525,20566346-20566561 80 2e-15
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098 31 1.3
12_02_0680 + 21903520-21904093,21904474-21905162 30 1.7
07_03_1535 + 27531468-27531892,27531988-27532407,27533183-275333... 29 4.0
11_01_0426 + 3271324-3271377,3272114-3272227,3272475-3272588,327... 29 5.3
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537... 28 7.0
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 9.2
04_03_1004 + 21637910-21638269,21638424-21638579,21640108-216402... 28 9.2
>03_01_0433 + 3353255-3353374,3353532-3353828
Length = 138
Score = 182 bits (442), Expect = 4e-46
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 98
Query: 330 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 437
HLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 99 HLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 134
>10_08_0018 + 14164103-14164225,14164596-14164892
Length = 139
Score = 176 bits (429), Expect = 1e-44
Identities = 85/96 (88%), Positives = 91/96 (94%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
+QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVKRITPR
Sbjct: 40 IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPR 99
Query: 330 HLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 437
HLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 100 HLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 135
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 151 bits (366), Expect = 6e-37
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +3
Query: 156 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 335
FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL
Sbjct: 65 FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 124
Query: 336 QLAIRGDEELDSLIKATIAGGGV 404
QLAIRGDEELD+LIK TIAGG V
Sbjct: 125 QLAIRGDEELDTLIKGTIAGGVV 147
>12_02_0605 - 20924385-20924606,20924705-20924899
Length = 138
Score = 123 bits (297), Expect = 1e-28
Identities = 64/100 (64%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI PR
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPR 85
Query: 330 HLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 446
H+QLA+R DEEL L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 86 HIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 125
>12_02_0151 - 14468480-14468698,14468902-14469090
Length = 135
Score = 119 bits (287), Expect = 2e-27
Identities = 64/100 (64%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 330 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 446
H+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 84 HIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
>07_03_0790 + 21536389-21536577,21536854-21537072
Length = 135
Score = 119 bits (287), Expect = 2e-27
Identities = 64/100 (64%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 330 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 446
H+QLA+R DEEL L+ ATIA GGV+P+IH+ L+ KK G
Sbjct: 84 HIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123
>07_03_0791 + 21539069-21539257,21539493-21539711
Length = 135
Score = 118 bits (284), Expect = 5e-27
Identities = 64/103 (62%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R LK + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 25 LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPR 83
Query: 330 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 455
H+QLA+R DEEL L+ TIA GGV+P+IH L+ KK G A
Sbjct: 84 HIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSA 126
>03_05_0949 + 29089293-29089487,29089592-29089810
Length = 137
Score = 118 bits (283), Expect = 7e-27
Identities = 62/100 (62%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R+LK + RVGA A VY +A+LEYL AEVLELAGNA++D K RI PR
Sbjct: 27 LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPR 85
Query: 330 HLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 446
H+QLA+R DEEL L+ TIA GGV+P+I + L+ KKGG
Sbjct: 86 HIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKKGG 125
>05_05_0119 - 22512228-22512500,22512577-22512795
Length = 163
Score = 112 bits (270), Expect = 3e-25
Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R+LK S R+G A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 35 LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPR 93
Query: 330 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPGA 455
H+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK G A
Sbjct: 94 HVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSAA 136
>03_02_0562 - 9469263-9469517,9469619-9469843
Length = 159
Score = 108 bits (260), Expect = 4e-24
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 329
LQFPVGRI R+LK + R+G A VY AA+LEYL AEVLELAGNA++D K RI PR
Sbjct: 37 LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPR 95
Query: 330 HLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 440
H+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 96 HVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133
>05_01_0107 + 706936-707202,707231-707485
Length = 173
Score = 91.9 bits (218), Expect = 5e-19
Identities = 60/115 (52%), Positives = 71/115 (61%), Gaps = 18/115 (15%)
Frame = +3
Query: 150 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE-----------------VLE 278
LQFPVGRI R+LK + RVG A VY AA+LEYL AE VLE
Sbjct: 34 LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEASHCLSLPLPNPSKPSMVLE 92
Query: 279 LAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 440
LAGNA++D K RI PRH+ LAIR DEEL L+ TIA GGV+P+I+ L+ KK
Sbjct: 93 LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 147
>08_02_0735 + 20564451-20564525,20566346-20566561
Length = 96
Score = 80.2 bits (189), Expect = 2e-15
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +3
Query: 258 LTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIG 434
L+ +VLELAGNA++D K RI PRH+QLA+R DEEL L+ A TIA GGV+P+IH L+
Sbjct: 22 LSIKVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 81
Query: 435 KKGGPGA 455
KK G A
Sbjct: 82 KKAGSSA 88
>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
Length = 142
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 330 HLQLAIRGDEELDSLIKATIAGGG 401
HL L + G EELD L++ I GGG
Sbjct: 37 HLSLGVGGAEELDLLLQVGIGGGG 60
>12_02_0680 + 21903520-21904093,21904474-21905162
Length = 420
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 183 LKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR-HLQLAIRGDE 359
L +R +SHG A Y A + L GNA + + +TP HL + R D
Sbjct: 52 LHHRGSSHGESRGIRATYPQARYPPMVRLAARLWGNAEAEAGYRVLTPTPHLDMGPRADP 111
Query: 360 ELDSLIKATIAGGG 401
L +A I GG
Sbjct: 112 AL----RAAIQNGG 121
>07_03_1535 +
27531468-27531892,27531988-27532407,27533183-27533341,
27533461-27533782
Length = 441
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +2
Query: 272 FGVGGKCV*RFKSEAYYSSALTTCY*RR*RIGQPHKSNYRWRRRHPTHTQIS 427
F VG K + EA Y A+ T R PHKS +R P HT+ S
Sbjct: 286 FQVGKKLILNMSIEAAYQRAMNTLTSWVHREVNPHKSLVIFRTYSPAHTRAS 337
>11_01_0426 +
3271324-3271377,3272114-3272227,3272475-3272588,
3272677-3272834,3273067-3273157,3273668-3273778
Length = 213
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 327 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 440
+ + L R DEELD L + GGV IH L+G+K
Sbjct: 141 QQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQK 178
>01_06_1695 +
39251266-39252390,39252852-39252983,39253560-39253748,
39253887-39253954,39254080-39254182,39254387-39254509
Length = 579
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 324 PRHLQLAIRGDEELDSLIKATIAGGGVIP 410
PRH+ + G E D L A+ AGG P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 285 GNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGG 398
G+ ++ + +T R I+ D E+D+L+KAT+ G
Sbjct: 274 GSGARYDMLSELTRRERNAGIKPDPEIDALMKATVVEG 311
>04_03_1004 +
21637910-21638269,21638424-21638579,21640108-21640202,
21640478-21640505,21640725-21640752,21642353-21642363
Length = 225
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -1
Query: 400 PPPAIVAFMRLSNSSS----PLIASCKCRGVIRFTFKSLDAFPANSKTSAVRYSK 248
PPP VA R S+SSS PL+ + + +L FPA+S V +K
Sbjct: 24 PPPHSVAPKRASSSSSSTTPPLLTTRRAASAASLLLAALPPFPASSPQLPVASAK 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,652,433
Number of Sequences: 37544
Number of extensions: 355610
Number of successful extensions: 900
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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