Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_P22
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 166 1e-41
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 166 1e-41
AJ270981-1|CAB65903.1| 223|Caenorhabditis elegans heat shock pr... 61 6e-10
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.4
U80031-2|AAB37612.1| 468|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 29 3.1
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.1
U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical pr... 27 9.5
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 166 bits (404), Expect = 1e-41
Identities = 85/136 (62%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Frame = -1
Query: 684 DRVNDALNATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQATGVEIVKKALRMPCMT 505
DRV DAL ATRAAVEEGIVPGGG ALLR + L+ K N DQ GV IVKKAL P T
Sbjct: 410 DRVTDALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQQIGVNIVKKALTQPIAT 469
Query: 504 IAKNAGIDGSVVVAKVE-DLGDEFGYDALNNEYVNMIEKGIIDPTKVVRTALTDASGVAS 328
I KNAG++ S ++ +V + +GYDALN ++V+M E GIIDPTKVVRTAL DASGVAS
Sbjct: 470 IVKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVAS 529
Query: 327 LLTTAEAVICEIPQEK 280
LL T E V+ EIP+E+
Sbjct: 530 LLATTECVVTEIPKEE 545
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 166 bits (404), Expect = 1e-41
Identities = 85/136 (62%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Frame = -1
Query: 684 DRVNDALNATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQATGVEIVKKALRMPCMT 505
DRV DAL ATRAAVEEGIVPGGG ALLR + L+ K N DQ GV IVKKAL P T
Sbjct: 410 DRVTDALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQQIGVNIVKKALTQPIAT 469
Query: 504 IAKNAGIDGSVVVAKVE-DLGDEFGYDALNNEYVNMIEKGIIDPTKVVRTALTDASGVAS 328
I KNAG++ S ++ +V + +GYDALN ++V+M E GIIDPTKVVRTAL DASGVAS
Sbjct: 470 IVKNAGLEPSSIIDEVTGNSNTSYGYDALNGKFVDMFEAGIIDPTKVVRTALQDASGVAS 529
Query: 327 LLTTAEAVICEIPQEK 280
LL T E V+ EIP+E+
Sbjct: 530 LLATTECVVTEIPKEE 545
>AJ270981-1|CAB65903.1| 223|Caenorhabditis elegans heat shock
protein 60 protein.
Length = 223
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -1
Query: 684 DRVNDALNATRAAVEEGIVPGGGSALLRCIPVLEQLKTVNSDQ 556
DRV DAL ATRAAVEEGIVPGGG ALLR + L+ K N DQ
Sbjct: 179 DRVTDALCATRAAVEEGIVPGGGVALLRSLTALKNYKAANEDQ 221
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +2
Query: 311 SAVVSSDATPLAS--VRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSSTLAT----T 472
+A+ +S +TP S + + TTF + + + + +S SSP S+TL+T T
Sbjct: 305 TAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTT 364
Query: 473 TEPSMPAFFAIVMHGILRAFFTISTPVA*SLLTVLSCSNTGIHLKSAEPPPGTIPSSTAA 652
T P + + + + + ++ +T T+L+ + T S T SST
Sbjct: 365 TTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVT 424
Query: 653 LVALRASLTLS 685
+LT S
Sbjct: 425 TTEPTTTLTTS 435
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +2
Query: 311 SAVVSSDATPLAS--VRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSSTLAT----T 472
+A+ +S +TP S + + TTF + + + + +S SSP S+TL+T T
Sbjct: 305 TAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTT 364
Query: 473 TEPSMPAFFAIVMHGILRAFFTISTPVA*SLLTVLSCSNTGIHLKSAEPPPGTIPSSTAA 652
T P + + + + + ++ +T T+L+ + T S T SST
Sbjct: 365 TTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVT 424
Query: 653 LVALRASLTLS 685
+LT S
Sbjct: 425 TTEPTTTLTTS 435
>U80031-2|AAB37612.1| 468|Caenorhabditis elegans Hypothetical
protein B0554.5 protein.
Length = 468
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 370 LCGVNDALFNHVYIFIVEGIIPKFISKILHLSNNNRTINACIFCYCHAWHPQSFLYNLYT 549
+CG+ D N V I ++PK ++ +S + +CI + P + LY +YT
Sbjct: 369 ICGIGDCCINSVRSVICALVMPKRRAQAFSVSKIYQAFGSCILFFL---SPITPLY-VYT 424
Query: 550 SGLITVDCFELF*YWNTSQECRTTSRYNT 636
GL + +++ ++ + T R T
Sbjct: 425 IGLPILAIIATILFFSIAKRTQITERKMT 453
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 317 VVSSDATPLASVRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSSTLATTTEPS 484
+++++ TP+ + R+ +T + + + +IM +AS ++SP SS ATTTEPS
Sbjct: 288 ILTTEPTPVTTERSTVSTTISTSLETTIM------QAS--SASPISSKPATTTEPS 335
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 642 EEGIVPGGGSALLRCIPVLEQLKTVNSDQATG-VEIVKKALRMPCMTIAKNAGIDGSVVV 466
+EG G G L + IPVL QLK +D +G + A++ P + D S +V
Sbjct: 341 DEGGGGGVGGLLRKRIPVLAQLKAAATDSNSGAATAMTTAIQPPNTNLNSITNSDNSKLV 400
Query: 465 A 463
A
Sbjct: 401 A 401
>U41548-2|AAA83204.1| 399|Caenorhabditis elegans Hypothetical
protein M02F4.1 protein.
Length = 399
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 GIGQGCPHHLCGVNDALFNHVYIFIVEGI-IPKFISKILHLSNNNRTI 483
GI QG PH LC ND +H + I I + + I KI + N +I
Sbjct: 343 GIQQGSPHVLCAKND---DHCFKKIQNTILVTEAIGKIFNRENTAHSI 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,080,051
Number of Sequences: 27780
Number of extensions: 276837
Number of successful extensions: 919
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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