Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_P19
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0340 - 14634664-14634770,14634968-14635076,14635150-146352...    29   4.6  
03_05_0778 - 27638380-27639906                                         29   4.6  

>04_03_0340 -
           14634664-14634770,14634968-14635076,14635150-14635236,
           14635325-14635392,14635929-14636076
          Length = 172

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 320 KRFFLQKTCNLYEASPRLRTVRRAIDVRPYADPN 421
           ++  L  TCNLY  +PR  TV +     P A PN
Sbjct: 132 EKMVLTDTCNLYNLTPRRTTVAQVKTSVPRALPN 165


>03_05_0778 - 27638380-27639906
          Length = 508

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 218 SSFTAAEGRLPSTWPPSVSRQYRVSVASVS 129
           S F+ A  RL    PPS++R +R+S  SVS
Sbjct: 273 SVFSVAHNRLTGVVPPSLARVWRLSWVSVS 302


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,511,478
Number of Sequences: 37544
Number of extensions: 419741
Number of successful extensions: 928
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)