Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_P11
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 296 9e-81
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 296 9e-81
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 289 1e-78
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 285 2e-77
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 285 3e-77
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 284 4e-77
U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical p... 75 4e-14
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 30 1.5
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 1.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.0
Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 8.0
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 296 bits (727), Expect = 9e-81
Identities = 137/218 (62%), Positives = 166/218 (76%), Gaps = 1/218 (0%)
Frame = -1
Query: 744 CLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQA 568
CL+E+ Y EME KV ++ + EL G ++PL GM+KE Q QLI DHFLFKEGDRFLQA
Sbjct: 142 CLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQA 201
Query: 567 ANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKI 388
ANACR+WP GRGI+HN KTFL+WCNEEDHLRIISMQ GG++ QV +RL+ V IEK+
Sbjct: 202 ANACRYWPKGRGIFHNNQKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQA 261
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTE 208
PFS DRLG+LTFCP+NLGTTVRASVHI + + LQ+RG GEH+E
Sbjct: 262 PFSRDDRLGWLTFCPSNLGTTVRASVHI-RLPKISAKPDFKSICDGLKLQIRGIHGEHSE 320
Query: 207 AEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKS 94
+EGGVYDISNK R+GLTE++AVK+MYDGIA LI +EK+
Sbjct: 321 SEGGVYDISNKARLGLTEFEAVKQMYDGIAHLIALEKA 358
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 296 bits (727), Expect = 9e-81
Identities = 137/218 (62%), Positives = 166/218 (76%), Gaps = 1/218 (0%)
Frame = -1
Query: 744 CLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQA 568
CL+E+ Y EME KV ++ + EL G ++PL GM+KE Q QLI DHFLFKEGDRFLQA
Sbjct: 179 CLSEANYLEMESKVKAIFDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQA 238
Query: 567 ANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKI 388
ANACR+WP GRGI+HN KTFL+WCNEEDHLRIISMQ GG++ QV +RL+ V IEK+
Sbjct: 239 ANACRYWPKGRGIFHNNQKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQA 298
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTE 208
PFS DRLG+LTFCP+NLGTTVRASVHI + + LQ+RG GEH+E
Sbjct: 299 PFSRDDRLGWLTFCPSNLGTTVRASVHI-RLPKISAKPDFKSICDGLKLQIRGIHGEHSE 357
Query: 207 AEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKS 94
+EGGVYDISNK R+GLTE++AVK+MYDGIA LI +EK+
Sbjct: 358 SEGGVYDISNKARLGLTEFEAVKQMYDGIAHLIALEKA 395
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 289 bits (709), Expect = 1e-78
Identities = 135/217 (62%), Positives = 163/217 (75%), Gaps = 1/217 (0%)
Frame = -1
Query: 744 CLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQA 568
CLTE Y EME+KV S + ELKGT+YPL GMSK+TQ QLI DHFLFKEGDR LQ
Sbjct: 154 CLTEDNYLEMEEKVKKAFSEFSDEELKGTYYPLDGMSKDTQNQLIADHFLFKEGDRHLQY 213
Query: 567 ANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKI 388
ANAC FWP GRGI+HN KTFL+W NEEDHLRIISMQ G D+ V +RL+ V IEK++
Sbjct: 214 ANACNFWPKGRGIFHNNKKTFLIWVNEEDHLRIISMQEGSDVGAVLERLIKGVRGIEKQV 273
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTE 208
FS DRLG+LTFCPTNLG+TVRASVHI +++ K LQ+RG GEH+E
Sbjct: 274 QFSRDDRLGWLTFCPTNLGSTVRASVHI-ALPKLSAREDFKQICDKLDLQLRGIHGEHSE 332
Query: 207 AEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEK 97
+EGGVYDISN+ R+GL+EY+AVK+MYDG+ LI++E+
Sbjct: 333 SEGGVYDISNRARLGLSEYEAVKKMYDGVKNLIEMEE 369
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 285 bits (700), Expect = 2e-77
Identities = 134/217 (61%), Positives = 162/217 (74%), Gaps = 1/217 (0%)
Frame = -1
Query: 744 CLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQA 568
CLT+ Y EME KV S + ELKG +YPL GM K+TQ+QLI DHFLFKEGDR LQ
Sbjct: 181 CLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHLQY 240
Query: 567 ANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKI 388
ANAC FWP GRGI+HN +KTFL+W NEEDH+RIISMQ G D+ V RL+ V IEK++
Sbjct: 241 ANACNFWPKGRGIFHNNDKTFLIWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIEKQV 300
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTE 208
PFS DRLG+LTFCPTNLG+TVRASVHI + E+ K +LQVRG GEH+E
Sbjct: 301 PFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLAARKDFI-EICEKLNLQVRGIHGEHSE 359
Query: 207 AEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEK 97
+ GGVYDISNK R+GL+EY AVK+MYDG+ +LI++E+
Sbjct: 360 SVGGVYDISNKARLGLSEYQAVKQMYDGVKKLIEMEE 396
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 285 bits (698), Expect = 3e-77
Identities = 130/218 (59%), Positives = 170/218 (77%), Gaps = 1/218 (0%)
Frame = -1
Query: 744 CLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQA 568
CL+E+ YK ME ++ +S+ + ELKGT+YPLTGM +ET+++LI DHFLFKEGDRFL+A
Sbjct: 142 CLSETNYKMMETRMKEIFNSITDPELKGTYYPLTGMDEETKKKLIADHFLFKEGDRFLKA 201
Query: 567 ANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKI 388
ANA R+WP GRGI+HNE KTFLVW NEEDHLRIISMQ GG++ +V RL+ +N + K
Sbjct: 202 ANANRYWPNGRGIFHNEKKTFLVWVNEEDHLRIISMQNGGNVGEVLARLIKGLNLVAAKA 261
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTE 208
PF+ H RLG+LTFCPTNLGTTVRASVHI +++ S LQ+RG GEH+E
Sbjct: 262 PFARHPRLGWLTFCPTNLGTTVRASVHI-KLPKISAKDDFKKICSDMKLQIRGIHGEHSE 320
Query: 207 AEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKS 94
++ G+YDISNK+R+GLTEY AV++MYDG+ +LI++EK+
Sbjct: 321 SKEGIYDISNKQRLGLTEYQAVRQMYDGLKKLIELEKA 358
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 284 bits (697), Expect = 4e-77
Identities = 133/217 (61%), Positives = 162/217 (74%), Gaps = 1/217 (0%)
Frame = -1
Query: 744 CLTESQYKEMEDKVSGTLSSL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQA 568
CLT+ Y EME KV S + ELKG +YPL GM K+TQ+QLI DHFLFKEGDR LQ
Sbjct: 209 CLTQDNYLEMEGKVKKAFSEYSDKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHLQY 268
Query: 567 ANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKI 388
ANAC FWP GRGI+HN +KTFL+W NEEDH+RIISMQ G D+ V RL+ V IEK++
Sbjct: 269 ANACNFWPKGRGIFHNNDKTFLIWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIEKQV 328
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTE 208
PFS DRLG+LTFCPTNLG+TVRASVHI + E+ K +LQVRG GEH++
Sbjct: 329 PFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLAARKDFI-EICEKLNLQVRGIHGEHSD 387
Query: 207 AEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEK 97
+ GGVYDISNK R+GL+EY AVK+MYDG+ +LI++E+
Sbjct: 388 SVGGVYDISNKARLGLSEYQAVKQMYDGVKKLIEMEE 424
>U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical
protein F11G11.13 protein.
Length = 106
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/76 (43%), Positives = 55/76 (72%)
Frame = -1
Query: 330 TTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEY 151
T++++SVHI +++ S+ LQ+RG GE+++ + G+YDISNK+R+GLTEY
Sbjct: 24 TSLKSSVHIKLPKISAKDDF-KKICSEMKLQIRGIHGEYSDLKEGIYDISNKQRLGLTEY 82
Query: 150 DAVKEMYDGIAELIKI 103
AV++MYDG+ +LI++
Sbjct: 83 QAVRQMYDGLKKLIEL 98
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = -3
Query: 715 GGQGXRHPVQPXGRAQGHFLPPHRHVEGDPAAAHRRP--LPVQGGRPLPAG 569
GG G P P G A P H G+P +R LP GRP P G
Sbjct: 171 GGPGPAGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQG 221
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 454 GRRP---AAGVQEAGERRQRDREEDPVLAPRPARLPHVLPDQ 338
GR P AG E E++ + E DP PRP P P+Q
Sbjct: 271 GRAPNTLKAGDHERKEKKPKKEERDPAAPPRPRGRPPKTPEQ 312
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -3
Query: 730 PVQGDGGQGXRHPVQPXGRAQGHFLPPHRHVEGDPAAAHRRP--LPVQGGRPLPAG 569
P Q GG+G P P G A P H G+P +R LP GRP P G
Sbjct: 160 PAQS-GGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPG 214
>Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVH 307
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 387 PFSHHDRLGFLTFCPTNLGTTVRASVH 307
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -3
Query: 730 PVQGDGGQGXRHPVQPXGRAQGHFLPPHRHVEGDPAAAHRRP--LPVQGGRPLPAG 569
P Q GG+G P P G A P H G+P +R P GRP P G
Sbjct: 160 PAQS-GGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGTPGASGRPGPQG 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.138 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,476,818
Number of Sequences: 27780
Number of extensions: 220869
Number of successful extensions: 901
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -