Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_P10
         (835 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97016-2|ABC71840.1|  216|Caenorhabditis elegans Hypothetical pr...    36   0.027
U97016-1|ABC71839.1|  234|Caenorhabditis elegans Hypothetical pr...    36   0.027
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    31   1.0  
U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U41007-12|AAA82272.1|  485|Caenorhabditis elegans Nucleoside tri...    29   3.1  
AL033514-16|CAA22103.2|  465|Caenorhabditis elegans Hypothetical...    29   4.1  
Z46812-4|CAN86624.1|  405|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AL031630-18|CAA21002.1|  278|Caenorhabditis elegans Hypothetical...    29   5.4  
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ...    28   9.5  
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ...    28   9.5  

>U97016-2|ABC71840.1|  216|Caenorhabditis elegans Hypothetical
           protein B0261.4b protein.
          Length = 216

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -3

Query: 833 IESVIRXRNIAYYKLETGETGERPVKDVINLIGMPEKYQPSEYDTPKFMNTR-WVRPYL 660
           IESV+  RN A ++LETGE+     + + +  G   + Q +E+  P  +  + +  PYL
Sbjct: 109 IESVVHERNDAVFRLETGESAAPRKRTITSFAGFTYQKQATEHFAPPQLGQKEYETPYL 167


>U97016-1|ABC71839.1|  234|Caenorhabditis elegans Hypothetical
           protein B0261.4a protein.
          Length = 234

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -3

Query: 833 IESVIRXRNIAYYKLETGETGERPVKDVINLIGMPEKYQPSEYDTPKFMNTR-WVRPYL 660
           IESV+  RN A ++LETGE+     + + +  G   + Q +E+  P  +  + +  PYL
Sbjct: 127 IESVVHERNDAVFRLETGESAAPRKRTITSFAGFTYQKQATEHFAPPQLGQKEYETPYL 185


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -3

Query: 596  HSEVRKAHNRDFNHVQHLLKRFPNLD---MDTLKAEYPNVDIEKAKRTKKSRGHF 441
            + E+RK H R FNH++        +D   +DT   E P  DIE +  TK  R  F
Sbjct: 850  NDEIRKGH-RKFNHLEQTEPTTNRVDASRLDTDSEESPEEDIEWSTATKLIRDKF 903


>U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical
           protein K03A1.4a protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -3

Query: 647 INSLAVKKFRRLYNEKIHSEVRKAH--NRDFNHVQHLLKRFPNLDMDTLKA 501
           IN+ A  K R       H+ ++K +  N D    +H L  F  L+MD+LKA
Sbjct: 35  INTTAYVKSREANLRNPHNYLKKTNLSNSDLRSRRHFLTLFKLLEMDSLKA 85


>U41007-12|AAA82272.1|  485|Caenorhabditis elegans Nucleoside
           triphosphatase protein 1 protein.
          Length = 485

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 605 EKIHSEVRKAHNRDFNHVQHLLKR--FPNLDMDTL 507
           +K   EVRK   +D+N +Q   KR  FPN D++ L
Sbjct: 337 QKFTDEVRKYCQKDWNDIQDGFKRNEFPNADIERL 371


>AL033514-16|CAA22103.2|  465|Caenorhabditis elegans Hypothetical
           protein Y75B8A.16 protein.
          Length = 465

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 457 FFVLLAFSISTFGYSAFKVSISRLGKRLSKCWTWLKSL-LCAFLTSLWIFSLYNLLNFFT 633
           F +  AFS S F    F+++        S+CWT+  SL L   +  + +++ Y ++    
Sbjct: 49  FSLTFAFSCSLFELIIFEIAGVMAPLSRSRCWTFCLSLILITLVVVIPVYTSYLIIRGIV 108

Query: 634 AKLLMKP 654
            K L  P
Sbjct: 109 RKHLQLP 115


>Z46812-4|CAN86624.1|  405|Caenorhabditis elegans Hypothetical
           protein ZK675.3a protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +1

Query: 553 TWLKSLLCAFLTSLWIFSLYNLLNFFTAKLLMKPCFRYGLT---QRVFINLGVSYSDG*Y 723
           T+LK LL  +  SLW     +LL F T   ++   +R+G+T   Q  FI   V   DG +
Sbjct: 8   TFLK-LLFRWKGSLWKAIWKHLLIFLTMYYIINAYYRFGMTKEQQNEFIKY-VMLVDG-W 64

Query: 724 FSGIPIRFITSF 759
              IP+ F+  F
Sbjct: 65  TKEIPLTFLLGF 76


>AL031630-18|CAA21002.1|  278|Caenorhabditis elegans Hypothetical
           protein Y38H6C.21 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 668 PYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHL 543
           P L +   + L + K RR  NEK HS+ +KAH   FN + ++
Sbjct: 26  PILNNLTFSLLFLHKRRRKSNEK-HSDFQKAHTPIFNQLYYI 66


>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical protein
            C25F9.2 protein.
          Length = 1469

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
 Frame = -3

Query: 731  PEKYQ-PSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNE------KIHSEVRKAH 573
            P  Y  P  YD  K + T   R Y    F+NS  V +F + Y E      K+H E+ K  
Sbjct: 791  PHLYNHPQNYD--KILPTLPPREYYAPKFMNSDTVLEFEKWYTENYNNGFKLHDELLKYC 848

Query: 572  NRDFNHVQHLLKRFPNLDMDTLKAEYPNVD 483
              D   +   L RF  +  +T     P V+
Sbjct: 849  RSDVRILVLTLVRFIKMCQNTFNDWNPLVN 878


>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
           protein R148.3a protein.
          Length = 1115

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 626 KFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDTLKAEYPNVDIEK 474
           K+R LYNEK+ + +    NR    ++H LK   + D+   K     +  EK
Sbjct: 797 KYRNLYNEKL-TAISDKENRSQIEMEHKLKNAES-DLQEAKRRAEEIGAEK 845


>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
           protein R148.3b protein.
          Length = 1130

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 626 KFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDTLKAEYPNVDIEK 474
           K+R LYNEK+ + +    NR    ++H LK   + D+   K     +  EK
Sbjct: 809 KYRNLYNEKL-TAISDKENRSQIEMEHKLKNAES-DLQEAKRRAEEIGAEK 857


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,189,921
Number of Sequences: 27780
Number of extensions: 357799
Number of successful extensions: 973
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)