Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_P09
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical pr...   239   1e-63
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...   103   1e-22
Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical pr...    81   1e-15
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    30   2.1  

>Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK669.4 protein.
          Length = 448

 Score =  239 bits (586), Expect = 1e-63
 Identities = 117/184 (63%), Positives = 142/184 (77%)
 Frame = -1

Query: 661 EDKVVPVTGFQRAMVKSMTEAMKIPHFVFSDEYNVTKLVESRAALKKQAEERGIRLTYMP 482
           ED  VP+ G+ RAMVK+MTEA+KIPHF ++DE NV  LV+ RA LK+ A+ER I+L+YMP
Sbjct: 216 EDVAVPIRGYTRAMVKTMTEALKIPHFGYNDEINVDSLVKYRAELKEFAKERHIKLSYMP 275

Query: 481 IIIKAASLSLSYLPILNSSLDSSCENLIYKASHNIGVAMDTPNGLVVPVIKNIQIKSILE 302
             IKAASL+L   P LNS+ D   EN+I+KASHNI +AMDTP GLVVP IKN + +SI E
Sbjct: 276 FFIKAASLALLEYPSLNSTTDEKMENVIHKASHNICLAMDTPGGLVVPNIKNCEQRSIFE 335

Query: 301 IAQELNTLQEKGSKGQLGLNDLTGGTFTISNIGIVGGTYTKPVIFPPQVAIGALGKIQVL 122
           IAQELN L E G K Q+   DL  GTF++SNIG +GGTY  PV+FPPQVAIGA+GKI+ L
Sbjct: 336 IAQELNRLLEAGKKQQIKREDLIDGTFSLSNIGNIGGTYASPVVFPPQVAIGAIGKIEKL 395

Query: 121 PRFD 110
           PRFD
Sbjct: 396 PRFD 399



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 21/32 (65%), Positives = 25/32 (78%)
 Frame = -2

Query: 99  NVVKAHILSVSWSADHRVIDGVTMARFSNXLK 4
           NV+  +I+ VSW ADHRV+DG TMARFSN  K
Sbjct: 403 NVIPVNIMKVSWCADHRVVDGATMARFSNRWK 434


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score =  103 bits (248), Expect = 1e-22
 Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 1/142 (0%)
 Frame = -1

Query: 571 DEYNVTKLVESRAALKKQ-AEERGIRLTYMPIIIKAASLSLSYLPILNSSLDSSCENLIY 395
           +E +++ L+E R   +K    + G++L  M   ++AA+ +L   P++N+ LD +   ++Y
Sbjct: 264 NEIDMSSLIEMRKTYQKDFVAKHGVKLGMMSPFVRAAAYALQESPVVNAVLDEN--EIVY 321

Query: 394 KASHNIGVAMDTPNGLVVPVIKNIQIKSILEIAQELNTLQEKGSKGQLGLNDLTGGTFTI 215
           +   +I VA+ TP GLVVPV++N++  +  +I  EL  L  K   G+L + D+ GGTFTI
Sbjct: 322 RHFVDISVAVATPKGLVVPVLRNVESMNYAQIELELANLGVKARDGKLAVEDMEGGTFTI 381

Query: 214 SNIGIVGGTYTKPVIFPPQVAI 149
           SN G+ G  +  P+I PPQ AI
Sbjct: 382 SNGGVFGSMFGTPIINPPQSAI 403


>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
 Frame = -1

Query: 649 VPVTGFQRAMVKSMTEAMK-IPHFVFSDEYNVTKLVESRAALK----KQAEERGIRLTYM 485
           +P++  ++ + K +TE+   IPH+  + E  +  L++ R  L     K    +  +++  
Sbjct: 278 IPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISIN 337

Query: 484 PIIIKAASLSLSYLPILNSSLDSSCENLIYKASH-NIGVAMDTPNGLVVPVIKNIQIKSI 308
             IIKA++L+   +P  NS      ++ I +  H ++ VA+ TP GL+ P+I N   K +
Sbjct: 338 DFIIKASALACQRVPEANSYW---MDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGL 394

Query: 307 LEIAQELNTLQEKGSKGQLGLNDLTGGTFTISNIGIVGGTYT-KPVIFPPQVAIGALG 137
             IA E+  L ++  +G+L  ++  GGTFT+SN+G+ G       +I PPQ  I A+G
Sbjct: 395 ATIASEIVELAQRAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIG 452


>Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical
           protein C30H6.7 protein.
          Length = 337

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = -1

Query: 649 VPVTGFQRAMVKSMTEA-MKIPHFVFSDEYN-VTKLVESRAALKKQAEERGIRLTYMPII 476
           +P++  +  + K +T +  +IPH     EY  V   ++   AL+++ ++ G  ++    I
Sbjct: 103 IPLSNIRATIAKRLTASKQQIPH-----EYQGVDVRIDDILALRQKLKKSGTAVSLNDFI 157

Query: 475 IKAASLSLSYLPILNSSLDSSCENLIYKASHNIGVAMDTPNGLVVPVIKNIQIKSILEIA 296
           IKAA+L+L  +P +N         L    S +I VA+ TP GL+ P+++N  I  +L I+
Sbjct: 158 IKAAALALRSVPTVNVRWTPEGIGL---GSVDISVAVATPTGLITPIVENSDILGVLAIS 214

Query: 295 QELNTLQEKGSKGQLGLNDLTGGTFTISNIGIVGG-TYTKPVIFPPQVAIGALG 137
            ++  L     + +L      GG+FTISN+G+ G  T    +I PPQ AI  +G
Sbjct: 215 SKVKELSGLARESKLKPQQFQGGSFTISNLGMFGSVTNFTAIINPPQCAILTIG 268


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
 Frame = -1

Query: 748  DSNEVVLPGSVRAVEIPVTKAQARVELALEDKVVPVTGFQRAMVKSMTEAMKIPHFVFSD 569
            D N+ VL   +   E P T+ +  V   +EDK      FQ+  + ++ + ++       D
Sbjct: 1320 DINDNVLAAILEPDEEPKTEEENDVVTEIEDKARDFGEFQKPTLLTICQEVEAYFSEHHD 1379

Query: 568  EYNVTKLVESRAALK--KQAEERGIRLTYMPIIIKAASLSLSYLPILNSSLDSSCENLIY 395
            EY V  +V+     K  K+     I   +  II +  S    Y+ + ++ + S  E   Y
Sbjct: 1380 EY-VGSVVDDMELRKIFKETYGGSIPEDHKQIIEEVCSFQPGYIHVFDALIGSKLE-FTY 1437

Query: 394  KASHNIGVAMDTPN 353
                NI   ++  N
Sbjct: 1438 TIMSNIDRKIEKEN 1451


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
 Frame = -1

Query: 748  DSNEVVLPGSVRAVEIPVTKAQARVELALEDKVVPVTGFQRAMVKSMTEAMKIPHFVFSD 569
            D N+ VL   +   E P T+ +  V   +EDK      FQ+  + ++ + ++       D
Sbjct: 1320 DINDNVLAAILEPDEEPKTEEENDVVTEIEDKARDFGEFQKPTLLTICQEVEAYFSEHHD 1379

Query: 568  EYNVTKLVESRAALK--KQAEERGIRLTYMPIIIKAASLSLSYLPILNSSLDSSCENLIY 395
            EY V  +V+     K  K+     I   +  II +  S    Y+ + ++ + S  E   Y
Sbjct: 1380 EY-VGSVVDDMELRKIFKETYGGSIPEDHKQIIEEVCSFQPGYIHVFDALIGSKLE-FTY 1437

Query: 394  KASHNIGVAMDTPN 353
                NI   ++  N
Sbjct: 1438 TIMSNIDRKIEKEN 1451


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,257,492
Number of Sequences: 27780
Number of extensions: 371787
Number of successful extensions: 1003
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)