Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_P07
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 136 5e-33
SPAC1805.16c |||purine nucleoside phosphorylase |Schizosaccharom... 78 2e-15
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.51
SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2 |Schizosacc... 27 3.6
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 3.6
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 3.6
SPCC1281.08 |wtf11|meu24|wtf element Wtf11|Schizosaccharomyces p... 26 6.3
SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 26 8.4
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 136 bits (328), Expect = 5e-33
Identities = 87/235 (37%), Positives = 124/235 (52%), Gaps = 9/235 (3%)
Frame = -1
Query: 786 VTPFGRP-SDVXIEGQIKRVQCVLLARHGRKHQLQPSDVNYRANIWALKQVGCTHILATT 610
+TP+G P S + I LARHG H P++V RANI ALK +G I++ +
Sbjct: 33 ITPWGYPASPISIARTTSGFLIAFLARHGVGHIYTPTEVPSRANIAALKSLGVLAIVSFS 92
Query: 609 ATGSLVEEYRPGDLVILDDFIDRTW-GRKCTFYDNTEGGPRGVCHLPMRPAYCERARAAL 433
A GSL E+ P D V+ IDRT R TF+ E G V H+ + + L
Sbjct: 93 AVGSLREDIPPEDFVLPTQIIDRTLCARPNTFF---ESGC--VAHVSFGDPFDQDLYEIL 147
Query: 432 YSAAKS--RGYSCH-----ETGTAVVIQGPRFSSRAESLVHRQWGGHLVNMTTVPEVVLA 274
S + G H + T V ++GP FS+RAES ++R WG ++NM+ +PE LA
Sbjct: 148 SSCGSNLKNGSKLHTKRKGDDLTVVCMEGPAFSTRAESNLYRSWGASIINMSVIPEAKLA 207
Query: 273 KEAGLSYAAVALVTDYDCWRENEKSVSVSEVLATFSKNVKKTADVIVDAVQILGA 109
+EA ++Y V + TDYDCWR NE+ V+V V+ S N +++AV+ L A
Sbjct: 208 REAEIAYQMVCMATDYDCWRMNEEPVTVETVMEHISNNKDNAKIFLLEAVKKLEA 262
>SPAC1805.16c |||purine nucleoside phosphorylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 77.8 bits (183), Expect = 2e-15
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Frame = -1
Query: 738 KRVQCVLLARHGRKHQLQPSDVNYRA-NIWALKQVGCTHILATTATGSLVEEYRPGDLVI 562
KRV ++LA GR H + + + +K +G ++ T A G L + ++ GDL+I
Sbjct: 93 KRVPTMILA--GRYHSYEGYPIEATTFPVRLMKVMGVEVMVVTNAAGGLNQGFKVGDLMI 150
Query: 561 LDDFIDRTWGRKCTFYDNTEGGPRGVCHLPMRPAYCERARAALYSAAKSRGYS--CHETG 388
L D I+ GV P+ AY R +Y AAK+ S HE G
Sbjct: 151 LKDHINFPGLAGMNPLRGPNAHEFGVRFPPLSDAYDLELRKLVYDAAKAHKVSRTIHE-G 209
Query: 387 TAVVIQGPRFSSRAESLVHRQWGGHLVNMTTVPEVVLAKEAGLSYAAVALVTDYDCWREN 208
+ GP F +RAES + G V M+TVPEVV+A+ G+ A++LVT+ E+
Sbjct: 210 CYAFVSGPCFETRAESRMLALMGADCVGMSTVPEVVVARHCGIRVLAISLVTNNVVVEES 269
Query: 207 EKSVSVSEV 181
+ + EV
Sbjct: 270 PSAKDLVEV 278
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.51
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 100 PPIPGRS-PGTRQIGHNASRTDGPPAP 23
P IPGRS P +G NASRT PP P
Sbjct: 393 PAIPGRSAPALPPLG-NASRTSTPPVP 418
>SPAC3G6.09c |tps2||trehalose-phosphate synthase Tps2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 849
Score = 27.1 bits (57), Expect = 3.6
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1
Query: 600 SLVEEYRPGDLVILDDF 550
++V YRPGDL+++ D+
Sbjct: 210 NIVSNYRPGDLILIHDY 226
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -1
Query: 810 ENQIEKEVVTPFGRPSDVXIEGQIKRVQCVLLARHGRKHQLQPSDVNYRANIWALKQ 640
+++++ E+ P ++ Q+ A H R LQPS + + WAL Q
Sbjct: 1126 KDEVKAEMTQPVVNQDSHDLQDQLATTPTAPTAFHYRPGLLQPSQTSVQHCCWALSQ 1182
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -1
Query: 810 ENQIEKEVVTPFGRPSDVXIEGQIKRVQCVLLARHGRKHQLQPSDVNYRANIWALKQ 640
+++++ E+ P ++ Q+ A H R LQPS + + WAL Q
Sbjct: 1126 KDEVKAEMTQPVVNQDSHDLQDQLATTPTAPTAFHYRPGLLQPSQTSVQHCCWALSQ 1182
>SPCC1281.08 |wtf11|meu24|wtf element Wtf11|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 441 RALSHNTPAAWAGGTRRADPPPCCRKTCTSDPKSYQ*NRPI 563
+ +HN G ++ PP CRKTC+S+ K Y P+
Sbjct: 69 QTFNHNESTTSVGHDN-SNSPPKCRKTCSSN-KVYSNEVPL 107
>SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 8.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 590 KNTGLEIWSYWTISLI 543
KN + IW+YW ++LI
Sbjct: 586 KNFDVRIWNYWLVALI 601
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,631,321
Number of Sequences: 5004
Number of extensions: 74520
Number of successful extensions: 191
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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