Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_P05
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 30 2.1
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.7
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.7
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 29 3.7
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 29 3.7
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 29 3.7
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 29 3.7
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 28 6.5
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 28 6.5
Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 28 8.6
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 8.6
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 8.6
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 100 bits (240), Expect = 1e-21
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
Frame = -1
Query: 488 NTRPHITPTIYPFXLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 309
N H T +P + L++++ + + S + + +IG +FQ QDDF+D +GD TGK
Sbjct: 191 NKTSHYT-VFHPIQMALIISDVL--AYHGSVKKVAYQIGFLFQSQDDFLDVYGDPKITGK 247
Query: 308 VGTDIQERKCTWLAVQALQRCTEAQR-------TVFKACYGSSEPAHVERIKRLYEDLHL 150
+GTDIQ+ KCTWLAV+ALQ+ + FK +GS +P VE+IKR+Y++L L
Sbjct: 248 IGTDIQDGKCTWLAVRALQKMHKTPEKWGAKLIEEFKTSFGSVDPEKVEKIKRIYDELQL 307
Query: 149 PQIYKHQEKAMYDNIIRQIENI 84
Q ++ EK I + I I
Sbjct: 308 KQEFRRFEKHFSGEIKKSISEI 329
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 6 LXYCLMLPIVRNIQQLFKENAGGLYC-YIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYA 182
L L+L I + + FK Y + ++ Y+I + F L ++ + ++F +
Sbjct: 22 LNLILLLAIFCSKRVTFKSELSLFYTRFAADIGYSISISNFKLYILAVMISEIFAVKNFI 81
Query: 183 FHMCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYICTN 308
F W T I G +L F T L R+ S F + C N
Sbjct: 82 FITLWLT-IIFGIIRTSLLFLTTLDRV---ISLFFPFFYCAN 119
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -2
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -2
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -2
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 187 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 234
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 437 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQ 291
+LA+ D K+++ A + +G FQ+ DD +D + GK V D++
Sbjct: 256 ILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 27 PIVRNIQQLFKENAGGLYCYIFNLSYNIVVHRFFLMLVYLREVKVFV 167
PI N +L LY +I N ++ + + + + L+Y E+K+FV
Sbjct: 124 PIFTNSTELITTTEDPLYVHINNTNHRLQIPQIHIPLLYEVELKLFV 170
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -2
Query: 355 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 209
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 188 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 84
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 383 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 417
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 188 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 84
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 362 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 396
>Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical
protein C25D7.10 protein.
Length = 225
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +3
Query: 189 MCWFTATITGFEYCTLCFSTALQRLNCQPSTFALLYICTNFTSFYFITEAVYEIVLNLEH 368
+ +F+ I L F T L P +L I T+ + F+ +I+L++
Sbjct: 125 LVYFSCFIIFMNTGQLVFYTLQNYLVLTPLKMLILLIATSSLNSIFL-----QILLSIFV 179
Query: 369 RSYFQANVLSRFINFFIH 422
YF+ LS I+F+IH
Sbjct: 180 FPYFEVVTLSTIISFYIH 197
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 21 MLPIVRNIQQLFKENAGGL--YCYIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYAFHMC 194
M+P+VRN+QQL E + IF +S N H + + R + F+ FY++
Sbjct: 435 MIPVVRNVQQLADELQLFVKEASEIFGVSDNF--HDVKCLSLDGRTYESFINQFYSYEPT 492
Query: 195 W 197
W
Sbjct: 493 W 493
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 197 PAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKK 51
P + +I+ L ++L + + QE AMY+ I +IE E V+FKK
Sbjct: 1444 PNYDRQIELLQDELDI----RRQESAMYEKKITEIEEERKEMYLVMFKK 1488
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 197 PAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENITIEAARVLFKK 51
P + +I+ L ++L + + QE AMY+ I +IE E V+FKK
Sbjct: 1440 PNYDRQIELLQDELDI----RRQESAMYEKKITEIEEERKEMYLVMFKK 1484
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = -1
Query: 188 VERIKRLYEDLH-----LPQIYKHQEKAMYD-NIIRQIENITIEAARVLFKKLLDITY 33
VE+I+ + ++L L Q+ + K + D N ++++ T+ + + + ++LLD+TY
Sbjct: 444 VEQIENIEDELRQKPEQLNQLSVYASKQVNDLNEMKEVLKTTVNSRKAILQRLLDVTY 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,677,154
Number of Sequences: 27780
Number of extensions: 406887
Number of successful extensions: 1104
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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