Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_P03
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M24355-1|AAA52454.1| 416|Homo sapiens FLG protein. 33 0.65
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 33 0.65
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 33 0.65
M29581-1|AAA61314.1| 543|Homo sapiens ZNF8 protein. 33 0.86
BC052266-1|AAH52266.1| 641|Homo sapiens FZD2 protein protein. 31 2.6
BC039323-1|AAH39323.1| 575|Homo sapiens zinc finger protein 8 p... 31 4.6
L37882-1|AAB46397.1| 565|Homo sapiens frizzled protein. 30 8.0
BC113404-1|AAI13405.1| 565|Homo sapiens FZD2 protein protein. 30 8.0
BC113402-1|AAI13403.1| 565|Homo sapiens FZD2 protein protein. 30 8.0
BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse... 30 8.0
AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein. 30 8.0
AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein. 30 8.0
AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc fi... 30 8.0
AB017364-1|BAA34667.1| 565|Homo sapiens frizzled-2 protein. 30 8.0
>M24355-1|AAA52454.1| 416|Homo sapiens FLG protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.65
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = +2
Query: 260 HDGHQRCSLLYVRNHQARRGSSYH-VRHHHRGSRAGSCGHRCGGQPRS---KHSRIWG-- 421
H G + S + Q+ GS + RHH SRA S GH GQ +S + SR WG
Sbjct: 119 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 178
Query: 422 ---EHRCRGHGRSQEK 460
+ +GH E+
Sbjct: 179 FSQDSDSQGHSEDSER 194
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 33.5 bits (73), Expect = 0.65
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = +2
Query: 260 HDGHQRCSLLYVRNHQARRGSSYH-VRHHHRGSRAGSCGHRCGGQPRS---KHSRIWG-- 421
H G + S + Q+ GS + RHH SRA S GH GQ +S + SR WG
Sbjct: 2507 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 2566
Query: 422 ---EHRCRGHGRSQEK 460
+ +GH E+
Sbjct: 2567 FSQDSDSQGHSEDSER 2582
Score = 30.7 bits (66), Expect = 4.6
Identities = 26/99 (26%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Frame = +2
Query: 299 NHQARRGSSYHVRHHHRG----SRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPX 466
+ + R S R+HH SR GS R + R+ H R G +Q
Sbjct: 631 SEDSERWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSS 690
Query: 467 XXXXXXXXXXXXXXVELHGQWVRHNEQGRNEPRHSVPGH 583
E HG RH Q + RHS GH
Sbjct: 691 GQAASSHEQARSSAGERHGS--RHQLQSADSSRHSGTGH 727
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 33.5 bits (73), Expect = 0.65
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = +2
Query: 260 HDGHQRCSLLYVRNHQARRGSSYH-VRHHHRGSRAGSCGHRCGGQPRS---KHSRIWG-- 421
H G + S + Q+ GS + RHH SRA S GH GQ +S + SR WG
Sbjct: 23 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 82
Query: 422 ---EHRCRGHGRSQEK 460
+ +GH E+
Sbjct: 83 FSQDSDSQGHSEDSER 98
>M29581-1|AAA61314.1| 543|Homo sapiens ZNF8 protein.
Length = 543
Score = 33.1 bits (72), Expect = 0.86
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 296 RNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSK 403
R Q+ +S+ V+H H SR S G R GQP S+
Sbjct: 469 RREQSSSRNSHLVQHQHPNSRKSSAGGRKAGQPESR 504
>BC052266-1|AAH52266.1| 641|Homo sapiens FZD2 protein protein.
Length = 641
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 598 ASSVMMPRHTMPRLITPLLIMPHPLSMQLH 509
A++ M PR +PRL+ PLL++P Q H
Sbjct: 73 AAASMRPRSALPRLLLPLLLLPAAGPAQFH 102
>BC039323-1|AAH39323.1| 575|Homo sapiens zinc finger protein 8
protein.
Length = 575
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 296 RNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSK 403
R Q+ +S+ V+H H SR S G GQP S+
Sbjct: 501 RREQSSSRNSHLVQHQHPNSRKSSAGGAKAGQPESR 536
>L37882-1|AAB46397.1| 565|Homo sapiens frizzled protein.
Length = 565
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 586 MMPRHTMPRLITPLLIMPHPLSMQLH 509
M PR +PRL+ PLL++P Q H
Sbjct: 1 MRPRSALPRLLLPLLLLPAAGPAQFH 26
>BC113404-1|AAI13405.1| 565|Homo sapiens FZD2 protein protein.
Length = 565
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 586 MMPRHTMPRLITPLLIMPHPLSMQLH 509
M PR +PRL+ PLL++P Q H
Sbjct: 1 MRPRSALPRLLLPLLLLPAAGPAQFH 26
>BC113402-1|AAI13403.1| 565|Homo sapiens FZD2 protein protein.
Length = 565
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 586 MMPRHTMPRLITPLLIMPHPLSMQLH 509
M PR +PRL+ PLL++P Q H
Sbjct: 1 MRPRSALPRLLLPLLLLPAAGPAQFH 26
>BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse)
protein.
Length = 1189
Score = 29.9 bits (64), Expect = 8.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 636 PAIPPRCGSFVPEH 595
PA PPRCG +PEH
Sbjct: 113 PACPPRCGPLMPEH 126
>AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 8.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 636 PAIPPRCGSFVPEH 595
PA PPRCG +PEH
Sbjct: 113 PACPPRCGPLMPEH 126
>AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 8.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 636 PAIPPRCGSFVPEH 595
PA PPRCG +PEH
Sbjct: 113 PACPPRCGPLMPEH 126
>AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc
finger transcription factor protein protein.
Length = 1189
Score = 29.9 bits (64), Expect = 8.0
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 636 PAIPPRCGSFVPEH 595
PA PPRCG +PEH
Sbjct: 113 PACPPRCGPLMPEH 126
>AB017364-1|BAA34667.1| 565|Homo sapiens frizzled-2 protein.
Length = 565
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 586 MMPRHTMPRLITPLLIMPHPLSMQLH 509
M PR +PRL+ PLL++P Q H
Sbjct: 1 MRPRSALPRLLLPLLLLPAAGPAQFH 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,666,073
Number of Sequences: 237096
Number of extensions: 1474815
Number of successful extensions: 4284
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4259
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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