Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_O16
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 53 2e-07
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 53 2e-07
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 44 1e-04
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81146-7|CAB03523.2| 517|Caenorhabditis elegans Hypothetical pr... 29 5.6
U53340-4|AAA96209.2| 445|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
+ G SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 266 NEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
+ G SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 266 NEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
+ G SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 279 NEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
+ G SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 279 NEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
+ G +A +KG SNV R TGGA VL +YDEI+ ++
Sbjct: 266 NEGITALYKGGLSNVFRATGGALVLTIYDEIQHLI 300
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2
Query: 847 GTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
G AFF GA N +RGTG A VL +Y+E++K +
Sbjct: 274 GPKAFFHGALVNAIRGTGAALVLAIYNELQKYM 306
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKK 755
+ G +KGA +N+ R GGA V+ LY+EI K
Sbjct: 272 EEGVRGLYKGALANIFRSAGGALVMALYEEIHK 304
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -2
Query: 847 GTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 749
G + F++GA +N LR TGGA ++ Y E K +
Sbjct: 266 GINGFYRGALTNSLRSTGGALIITFYYEFSKYM 298
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 853 DRGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 761
+ G A +KG V+R G GGA +L++YDE+
Sbjct: 250 EEGFGALYKGLLPKVMRLGPGGAVMLIVYDEV 281
>Z81146-7|CAB03523.2| 517|Caenorhabditis elegans Hypothetical
protein K10D11.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2
Query: 406 FSLVPEAKAELKIVQNFILKEVFNVLSILNLSFVGIENFHFFLHSG 269
FS+VP IVQ+ + E + +S LNL+ G+E H SG
Sbjct: 253 FSIVPIPSHHHVIVQDASMYENISQISSLNLNEFGVEVVHLNASSG 298
>U53340-4|AAA96209.2| 445|Caenorhabditis elegans Hypothetical
protein F02E8.2a protein.
Length = 445
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 544 FENFLILTSQLLSYYIIYC*FKMKND*FFLC 452
FE+ + +T L ++IIYC F++ FLC
Sbjct: 249 FESAITITFVLPLFFIIYCYFRILGTRHFLC 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,489,751
Number of Sequences: 27780
Number of extensions: 349425
Number of successful extensions: 661
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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