Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_O14
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0544 - 18455161-18455223,18455470-18455591,18455772-18456084     31   0.97 
08_01_0167 + 1370733-1371316,1371590-1371765,1371865-1372101,137...    30   1.7  
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594...    29   3.0  
11_01_0699 - 5757410-5757458,5757760-5757831,5758084-5758152,575...    29   3.9  
03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059     29   5.2  
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051...    28   6.9  
10_08_0518 + 18486315-18486462,18486495-18486712,18486763-184868...    28   9.1  

>09_04_0544 - 18455161-18455223,18455470-18455591,18455772-18456084
          Length = 165

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 597 KERRRWTKSERHVGVEADYFLREESXHXATDESTPITSLDVXLL 728
           ++RRRW +  R   + A   L E++   A DE+    SL   LL
Sbjct: 46  QQRRRWRRPRRAAAIAASLDLNEDNVRLAIDEAKAEASLSPPLL 89


>08_01_0167 +
           1370733-1371316,1371590-1371765,1371865-1372101,
           1372377-1372495,1372530-1372906,1373012-1373117,
           1373520-1373606,1375367-1375421,1375775-1376311,
           1377669-1377739,1377899-1377938,1379560-1379852
          Length = 893

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 188 QAKYELAYQPPCILKLKYPKLVNASXIEDGGHFLAFELPERXAQGRTLKAIR 33
           QA ++    PPC+ +L YP         + GH  A++ PE   +   L+ IR
Sbjct: 537 QASHQPVANPPCVFELLYPNESEQMNDREFGHTRAYD-PELLRKTGDLRPIR 587


>08_02_0644 -
           19658270-19658626,19659142-19659218,19659256-19659430,
           19659543-19659596,19659691-19659858,19660756-19660953,
           19661546-19661632,19661739-19661827,19662499-19662955
          Length = 553

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 716 VQGGDWGALIGSXMXTFFPKEII 648
           +Q G+W  ++G  +  +FPKEII
Sbjct: 437 IQTGNWQVVVGDEVVGYFPKEII 459


>11_01_0699 -
           5757410-5757458,5757760-5757831,5758084-5758152,
           5758329-5758477,5758568-5758699,5758784-5759109,
           5759330-5759399,5759684-5759738,5760322-5760377,
           5760500-5760700,5761466-5761651,5761756-5761906,
           5761978-5762206,5762321-5762582,5762858-5762959
          Length = 702

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 85  ARKCPPSSMXLALTSFGYFSLRMQGGW*ASSYFAWSTHVGTCT*ISSSFKFKCLEL 252
           +R    SS        G +++R+Q  W  SS  A+   V TCT I+     KC+E+
Sbjct: 235 SRSAEMSSQEFTDLVLGNWTVRLQATWNGSSLEAYRQQVKTCTEIA----LKCVEI 286


>03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059
          Length = 338

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 737 LGYKQXYVQGGDWGALIGSXMXTFFPKEI 651
           LG  + +V G DWGA+I   M  F P  +
Sbjct: 101 LGLAKVFVVGHDWGAIIAWYMCLFRPDRV 129


>11_04_0455 +
           17903921-17904046,17904149-17904214,17905028-17905116,
           17905513-17905658,17905743-17905867,17905964-17906057,
           17906144-17906307,17906449-17906610,17906683-17906809,
           17906854-17906862,17906912-17907078,17907113-17907307,
           17907398-17907490
          Length = 520

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = -3

Query: 629 ALTLSPAATFLEFVGALFPSLIVEPELANRLYPLSEKYSTLLEELGYLHIQATKPDTVGI 450
           A ++SP A   + + A+   +I+  + +NR YP ++K + + E   +   +  K     +
Sbjct: 340 ATSMSPPAV-QQVISAI--KVILGEDGSNRGYPCAQKLARIRENSNFFRSELKKMGFEVL 396

Query: 449 GLTDSPA-GLLAYILEKFSTWTNPDLRSKE 363
           G  DSP   ++ Y   K   ++   LR K+
Sbjct: 397 GDNDSPVMPIMLYNPAKIPAFSRECLRQKK 426


>10_08_0518 +
           18486315-18486462,18486495-18486712,18486763-18486808,
           18487436-18487709,18487797-18488052
          Length = 313

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
 Frame = -3

Query: 254 FSSRHLNLKLDEIQVQVPTWVLQAKYELAYQPPCILKL-------KYPKLVNASXIEDGG 96
           + S H N  + + + QVP +V+  + +  ++ P I  +       K+   +  + I +G 
Sbjct: 228 YRSMHQNKPIGDAKFQVPVFVVMGEKDYVFKIPGIESVMKDGSMEKHAPDLKITYIPEGS 287

Query: 95  HFLAFELPE 69
           HF+  + PE
Sbjct: 288 HFVQEQFPE 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,396,203
Number of Sequences: 37544
Number of extensions: 444287
Number of successful extensions: 1118
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)