Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_O10
         (784 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0022 - 20291787-20291864,20291989-20292010,20292269-202932...    30   1.8  
08_02_1477 - 27375872-27376723,27376825-27377091                       30   1.8  
09_04_0375 - 17055024-17055956,17056045-17056296                       28   7.3  
01_03_0090 - 12347165-12348349                                         28   9.6  

>09_06_0022 -
           20291787-20291864,20291989-20292010,20292269-20293218,
           20293339-20293629
          Length = 446

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 582 DHFEYVIWRYHEIETDPKKKTFTGNNLES---QLTKWSLKKIIPQK 710
           D   +V+WR  E   D   K F  NN  S   QL  +  +KI+P +
Sbjct: 61  DGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR 106


>08_02_1477 - 27375872-27376723,27376825-27377091
          Length = 372

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 582 DHFEYVIWRYHEIETDPKKKTFTGNNLES---QLTKWSLKKIIPQK 710
           D   +V+WR  E   D   K F  NN  S   QL  +  +KI+P +
Sbjct: 53  DGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR 98


>09_04_0375 - 17055024-17055956,17056045-17056296
          Length = 394

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +3

Query: 594 YVIWRYHEIETDPKKKTFTGNNLES---QLTKWSLKKIIPQK 710
           +V+WR  E   D     F  NN  S   QL  +  +K++P++
Sbjct: 52  FVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPER 93


>01_03_0090 - 12347165-12348349
          Length = 394

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 639 KTFTGNNLESQLTKWSLKKIIPQKKLQEITLSFSSPSHR 755
           +T T + + + L +  +K +IP K L E T+   +PS R
Sbjct: 201 ETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGR 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,786,085
Number of Sequences: 37544
Number of extensions: 232780
Number of successful extensions: 409
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)