Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_O04
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    31   0.93 
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    31   0.93 
U50191-7|AAK31555.2|  454|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    29   5.0  
AC006722-2|AAK68422.1|  296|Caenorhabditis elegans Hypothetical ...    28   6.6  
AC006645-7|AAF39840.1|  296|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z73103-4|CAA97426.1|  585|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AF022970-1|AAB69895.1|  142|Caenorhabditis elegans Hypothetical ...    28   8.7  

>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 421 LHTTLQNYCFIDSRSQVTTTSNYIDMSNSNKNRIHI 528
           +H T  N   + S + VTTT+  I  +N+N N IHI
Sbjct: 228 IHDTFANVTNVSSNTNVTTTTTTI--NNNNNNNIHI 261


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 421 LHTTLQNYCFIDSRSQVTTTSNYIDMSNSNKNRIHI 528
           +H T  N   + S + VTTT+  I  +N+N N IHI
Sbjct: 271 IHDTFANVTNVSSNTNVTTTTTTI--NNNNNNNIHI 304


>U50191-7|AAK31555.2|  454|Caenorhabditis elegans Hypothetical
           protein T14B4.9 protein.
          Length = 454

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 44  YKSIPF*EKQTILVTFQENLFCYFVSAK 127
           YK   F EKQ  +    +N+FC+F+ +K
Sbjct: 115 YKDYEFLEKQVQMSYHPQNIFCFFIDSK 142


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
           protein Y32H12A.8 protein.
          Length = 3901

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 343 CADLRVECTGK*LKSVTGGETVSS-VPCFIKVLVALDSFLMCNNIRE 206
           CA + + C GK L       TV+  + C++++L  L+ FL+C  IR+
Sbjct: 701 CAAISMVC-GKRLLDAVDPYTVNGWIQCYMEMLHRLELFLVCAKIRK 746


>AC006722-2|AAK68422.1|  296|Caenorhabditis elegans Hypothetical
           protein Y19D10A.9 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 373 DG*EKVGERNAMNEEVLHTTLQ-NYCFIDSRSQVTTTSNYIDMSNS 507
           DG E+    N  N  VLH TLQ N+     RSQ   T  +I +S +
Sbjct: 41  DGAERACSGNNQNLAVLHNTLQTNFLASIVRSQTGATKFWIGLSRA 86


>AC006645-7|AAF39840.1|  296|Caenorhabditis elegans Hypothetical
           protein F56A4.2 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 373 DG*EKVGERNAMNEEVLHTTLQ-NYCFIDSRSQVTTTSNYIDMSNS 507
           DG E+    N  N  VLH TLQ N+     RSQ   T  +I +S +
Sbjct: 41  DGAERACSGNNQNLAVLHNTLQTNFLASIVRSQTGATKFWIGLSRA 86


>Z73103-4|CAA97426.1|  585|Caenorhabditis elegans Hypothetical
           protein C08F8.5 protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 397 RNAMNEEVLH---TTLQNYCFIDSRSQVTTTSNYIDMSNSNKNRIHIIKI 537
           R  MN E+ H   T L+  C+ D+R +   +   + + N N  +  IIKI
Sbjct: 161 RAPMNMEIEHAIETILKGICYKDAREEDAASIKLVHICNGNTFKHPIIKI 210


>AF022970-1|AAB69895.1|  142|Caenorhabditis elegans Hypothetical
           protein F13A2.1 protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 234 ESKATKTLMKHGTDETVSPPVTDLSHLPVHSTRRSAHYQESKISRE*W 377
           E+   K+L+++GT+   S P+TD   +      R    QE     E W
Sbjct: 86  ENDLEKSLLENGTETAGSEPITDQEMIEKEELARFLALQEEAWMEELW 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,541,357
Number of Sequences: 27780
Number of extensions: 287715
Number of successful extensions: 793
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)